Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AL138796.6	Gene	0	3.57	0.45	5.91	2.15	0.76	6.76	10.83
2	375552	Transcript	0	2.82	0.30	4.46	1.89	0.70	6.30	9.48
3	ER1a	ExonRegion	0	5.68	1.43	10.36	3.33	2.39	21.08	23.68
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER2a	ExonRegion	0	20.47	1.60	32.47	12.74	2.33	31.36	50.75
6	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER3a	ExonRegion	0	23.36	1.61	28.87	17.06	8.08	49.21	72.50
8	E3_Da	NovelBoundary	0	0.00	0.00	11.64	1.49	0.00	3.46	7.80
9	E3a_E4a	KnownJunction	0	12.33	0.00	20.15	13.55	4.56	55.74	75.27
10	I3	Intron	0	2.13	0.40	5.61	0.61	0.18	4.22	7.60
11	I3_SR1	SilentIntronRegion	0	2.14	0.40	5.63	0.62	0.18	4.24	7.64
12	ER4a	ExonRegion	0	10.44	0.19	25.03	11.78	4.22	32.03	64.33
13	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER5a	ExonRegion	0	15.89	2.52	27.44	5.83	2.36	22.46	36.87
15	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	I5_SR4	SilentIntronRegion	0	3.41	0.55	9.59	0.00	1.48	1.18	5.65
17	I5_AR12	ActiveIntronRegion	0	5.14	1.18	12.68	3.63	1.05	2.66	7.14
18	ER6a	ExonRegion	0	8.83	1.66	13.03	3.39	1.27	14.55	16.98
19	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER7a	ExonRegion	0	7.23	2.07	7.80	2.19	0.85	6.78	10.31
21	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER8a	ExonRegion	0	0.12	0.17	0.00	0.00	0.00	0.00	0.00
23	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.25
25	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER11a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	Ix_AR1	ActiveIntronRegion	0	59.96	14.58	15.32	8.83	0.62	12.27	2.78
41	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	ER19a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00