Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AL138796.6	Gene	0	0.28	0.18	0.46	0.24	0.07	0.50	0.77
2	338347	Transcript	0	1593.62	1750.47	1461.48	2070.38	200.19	1685.14	2218.25
3	322098	Transcript	0	0.43	0.01	0.46	0.01	0.00	0.02	0.17
4	ER1a	ExonRegion	0	0.82	0.54	2.78	0.87	0.58	1.31	4.52
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER2a	ExonRegion	0	0.85	0.67	2.50	0.80	0.73	0.51	3.35
7	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER3a	ExonRegion	0	0.41	0.00	1.37	0.50	0.20	0.62	2.92
9	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E8a_E11b	NovelJunction	0	1.02	0.00	1.64	3.85	0.00	3.03	14.76
21	ER9a	ExonRegion	0	2.60	0.50	1.97	0.72	0.00	1.46	2.06
22	E9_Da	KnownBoundary	0	884.75	1110.10	885.07	1483.05	148.21	1091.39	1455.70
23	E9a_E11b	KnownJunction	0	1593.62	1750.47	1461.48	2070.38	200.19	1685.14	2218.25
24	E9a_E12a	NovelJunction	0	5.87	11.69	3.26	28.77	1.89	31.46	11.11
25	ER9b	ExonRegion	0	0.26	0.00	0.42	0.00	0.00	0.00	0.00
26	E9b_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER10a	ExonRegion	0	1.11	0.00	1.12	0.00	0.00	0.00	0.34
28	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER11a	ExonRegion	0	0.79	0.03	0.76	0.05	0.00	0.11	0.49
30	E11_Ab	KnownBoundary	0	482.37	583.80	394.64	728.89	99.43	585.82	841.44
31	ER11b	ExonRegion	0	1.43	1.57	1.63	2.43	0.00	5.77	3.15
32	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER12a	ExonRegion	0	0.43	1.71	0.68	2.06	0.00	4.53	0.69
34	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	Ix_AR1	ActiveIntronRegion	0	59.96	14.58	15.32	8.83	0.62	12.27	2.78
36	ER13a	ExonRegion	0	0.88	1.07	0.07	0.46	0.00	2.39	1.57
37	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	IG23_AR4	ActiveIntergenicRegion	0	1.08	0.88	1.50	2.36	1.88	15.23	4.38
42	IG23_AR6	ActiveIntergenicRegion	0	0.00	1.08	1.48	0.50	0.57	8.28	1.72