Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SETDB1	Gene	0	65.44	50.76	73.49	39.31	133.62	46.05	48.80
2	271640	Transcript	0	0	0	0	0	0	0	0
3	368964	Transcript	0	0	0	0	0	0	0	0
4	368969	Transcript	0	29.74	36.30	36.55	21.01	68.19	30.47	19.49
5	368963	Transcript	0	0	0	0	0	0	0	0
6	368962	Transcript	0	2.34	6.28	4.27	9.26	5.69	7.32	3.35
7	368960	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1a	ExonRegion	0	7.09	2.90	6.15	1.92	12.21	0.85	4.00
9	ER1b	ExonRegion	0	19.52	4.76	17.56	7.08	32.82	1.23	7.96
10	ER1c	ExonRegion	1	29.31	10.67	25.69	11.13	82.26	1.49	10.12
11	ER1d	ExonRegion	1	25.87	10.87	27.03	9.88	77.96	5.36	8.96
12	E1b_E3a	KnownJunction	0	11.80	11.77	14.47	7.18	21.49	5.74	6.46
13	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	46.85	61.13	64.34	42.85	111.12	49.31	43.15
15	E3a_E4a	KnownJunction	0	42.06	55.67	75.85	33.54	114.13	42.00	44.41
16	ER4a	ExonRegion	0	59.46	73.04	100.66	51.94	129.49	47.64	63.22
17	E4_Da	NovelBoundary	0	12.37	18.60	7.43	23.30	11.48	12.44	7.01
18	E4a_E5a	KnownJunction	0	66.58	54.28	90.59	41.21	185.85	34.60	41.88
19	I4_AR1	ActiveIntronRegion	0	6.91	9.16	6.79	10.74	11.78	5.26	5.44
20	ER5a	ExonRegion	0	79.87	61.26	118.27	45.75	194.57	38.85	57.26
21	E5a_E6a	KnownJunction	0	68.03	50.91	96.57	23.70	175.27	27.58	50.20
22	ER6a	ExonRegion	0	87.33	77.44	132.55	50.10	172.25	47.41	67.72
23	E6a_E7a	KnownJunction	0	98.75	74.19	155.66	57.60	181.43	38.62	63.45
24	ER7a	ExonRegion	0	113.04	83.86	144.68	56.71	202.83	57.11	79.14
25	E7a_E8a	KnownJunction	0	131.27	60.50	140.10	50.28	171.70	35.86	53.04
26	E7a_E9a	KnownJunction	0	0.00	3.23	1.14	6.37	8.99	5.65	6.13
27	ER8a	ExonRegion	0	118.60	58.39	133.70	43.73	191.70	41.03	63.71
28	E8a_E9a	KnownJunction	0	122.97	58.90	124.06	47.08	177.07	48.35	61.09
29	ER9a	ExonRegion	0	88.43	65.95	94.19	42.13	161.24	48.97	69.49
30	E9a_E10a	KnownJunction	0	39.10	53.23	61.17	36.41	127.53	28.43	55.08
31	E10_Aa	NovelBoundary	0	9.11	6.86	5.56	8.18	8.11	12.52	6.49
32	ER10a	ExonRegion	0	62.03	45.87	62.84	34.93	152.77	41.68	54.06
33	E10_Da	KnownBoundary	0	0.67	5.57	0.00	3.96	1.98	1.61	1.63
34	E10a_E11a	KnownJunction	0	96.72	36.49	81.58	37.41	193.81	26.24	48.11
35	E10_Db	KnownBoundary	0	0.97	2.15	3.68	2.49	1.15	4.10	3.24
36	ER10b	ExonRegion	0	1.54	13.36	3.39	4.99	4.86	4.90	5.40
37	ER10c	ExonRegion	0	2.34	6.28	4.27	9.26	5.69	7.32	3.35
38	E10_Dc	NovelBoundary	0	1.67	8.83	5.20	11.41	0.00	6.14	1.28
39	ER11a	ExonRegion	0	123.13	52.05	102.20	44.11	200.78	48.01	73.85
40	E11a_E12a	KnownJunction	0	72.10	61.48	68.29	44.16	174.26	59.17	50.22
41	ER12a	ExonRegion	0	76.82	47.31	75.00	40.90	177.86	34.64	62.20
42	E12a_E13a	KnownJunction	0	39.09	20.26	38.17	22.16	40.27	19.56	33.69
43	ER13a	ExonRegion	0	41.05	35.43	37.46	24.37	71.54	24.94	38.58
44	E13a_E14a	KnownJunction	0	48.87	38.51	48.38	37.66	122.18	32.64	55.52
45	ER14a	ExonRegion	0	66.37	37.19	69.32	26.13	110.17	37.68	45.13
46	E14a_E15a	KnownJunction	0	91.26	23.62	94.83	21.70	161.44	43.15	48.30
47	ER15a	ExonRegion	0	83.94	37.91	87.29	33.80	152.40	51.04	49.75
48	E15a_E16a	KnownJunction	0	103.26	39.17	104.82	38.93	153.44	31.92	45.99
49	E16_Aa	NovelBoundary	1	7.54	5.91	14.43	19.75	1.87	20.13	6.06
50	ER16a	ExonRegion	0	93.79	52.34	113.94	58.04	178.78	59.94	61.45
51	E16_Da	NovelBoundary	1	23.43	15.74	31.38	33.54	14.80	42.48	21.67
52	E16a_E17a	KnownJunction	0	84.63	34.02	69.51	22.92	138.11	37.89	39.15
53	I16	Intron	1	9.06	10.76	18.91	18.16	15.16	18.82	12.02
54	I16_AR1	ActiveIntronRegion	1	10.68	13.39	22.26	23.15	17.12	24.03	15.32
55	E17_Aa	NovelBoundary	1	13.97	19.65	17.56	35.81	17.31	14.79	15.26
56	ER17a	ExonRegion	0	64.88	53.56	72.04	48.64	137.87	51.10	52.94
57	E17_Da	NovelBoundary	1	9.73	23.75	9.11	23.81	14.71	6.91	14.92
58	E17a_E18a	KnownJunction	0	47.53	38.20	50.22	20.70	124.05	43.07	37.73
59	I17	Intron	0	15.53	12.07	17.22	13.27	15.39	12.17	8.76
60	I17_SR1	SilentIntronRegion	0	10.26	15.70	10.52	18.49	10.68	14.69	6.86
61	I17_AR2	ActiveIntronRegion	0	17.97	11.96	20.15	12.68	17.53	12.47	9.83
62	E18a_E19a	KnownJunction	0	65.41	42.85	57.42	40.07	170.18	39.02	38.51
63	ER18a	ExonRegion	0	67.17	52.91	70.92	34.10	164.90	51.66	43.43
64	E19_Aa	NovelBoundary	0	16.02	16.34	25.41	19.13	14.11	7.26	9.70
65	ER19a	ExonRegion	0	90.84	62.75	85.87	44.70	205.28	64.93	57.62
66	E19_Da	NovelBoundary	0	20.33	12.74	22.99	9.62	16.92	11.31	18.26
67	E19a_E20a	KnownJunction	0	55.53	51.33	74.27	33.38	176.22	63.65	46.25
68	I19	Intron	1	17.18	14.90	16.25	19.38	21.37	16.44	13.11
69	I19_AR1	ActiveIntronRegion	1	17.30	15.02	16.38	19.53	21.53	16.55	13.21
70	E20_Aa	NovelBoundary	0	10.35	21.73	10.42	37.79	20.89	30.77	7.90
71	ER20a	ExonRegion	0	53.12	71.17	68.27	52.21	172.65	61.74	52.27
72	E20_Da	NovelBoundary	1	5.99	6.96	21.45	8.51	11.07	5.57	8.71
73	E20a_E21a	KnownJunction	0	65.02	66.13	82.89	44.21	221.35	67.51	58.30
74	E21_Aa	NovelBoundary	0	7.18	16.16	10.07	5.15	7.81	7.77	12.37
75	ER21a	ExonRegion	0	60.61	73.66	78.36	46.54	156.94	68.53	63.40
76	E21_Da	NovelBoundary	1	4.81	0.00	13.28	7.99	8.28	3.06	12.87
77	E21a_E22a	KnownJunction	0	53.02	54.20	56.76	37.14	181.10	58.58	52.57
78	I21	Intron	0	3.77	5.82	10.77	9.36	8.64	2.58	7.28
79	I21_SR1	SilentIntronRegion	1	4.71	6.32	13.50	11.64	8.26	5.23	11.11
80	I21_AR2	ActiveIntronRegion	1	3.65	3.16	10.84	11.56	7.15	2.57	6.79
81	E22_Aa	NovelBoundary	0	3.66	6.88	7.56	15.09	4.54	5.20	5.68
82	ER22a	ExonRegion	0	57.97	50.04	60.57	40.25	152.02	55.36	43.11
83	E22a_E23a	KnownJunction	0	42.93	53.94	52.58	31.24	97.67	41.46	27.10
84	E22a_E23b	KnownJunction	0	1.52	1.63	0.00	0.00	1.73	1.45	1.50
85	ER23a	ExonRegion	0	44.76	53.76	54.36	31.80	101.64	46.28	31.37
86	ER23b	ExonRegion	0	51.88	53.68	50.98	42.22	106.97	59.67	34.27
87	ER23c	ExonRegion	0	1.54	1.21	2.71	0.00	5.26	3.68	0.00
88	IG41_AR2	ActiveIntergenicRegion	0	3.00	1.85	4.74	5.28	7.17	3.85	8.22
89	IG41_AR3	ActiveIntergenicRegion	0	1.81	2.43	4.74	4.43	5.87	4.05	8.94