Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	BCL9	Gene	0	52.59	44.93	134.35	129.67	150.20	124.96	28.18
2	234739	Transcript	0	52.91	47.73	145.00	132.58	139.46	136.85	31.96
3	ER1a	ExonRegion	0	0.01	0.01	0.01	0.00	20.91	0.01	0.01
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	21.74	0.00	0.00
5	ER2a	ExonRegion	0	22.57	31.59	70.24	72.87	79.32	71.12	11.94
6	E2a_E3a	KnownJunction	0	27.17	41.19	90.71	116.87	135.25	107.47	18.66
7	ER3a	ExonRegion	0	27.86	45.58	102.43	116.25	92.81	131.83	23.52
8	E3a_E4a	KnownJunction	0	30.43	45.55	117.25	114.60	78.45	147.29	30.15
9	E3a_E5a	NovelJunction	0	0.00	1.00	4.81	9.62	2.01	7.42	0.00
10	ER4a	ExonRegion	0	41.76	59.36	140.13	123.65	124.11	120.13	32.80
11	E4a_E5a	KnownJunction	0	48.68	40.51	135.44	140.44	120.64	116.71	39.38
12	ER5a	ExonRegion	0	35.81	57.04	153.05	154.35	103.02	118.05	27.80
13	E5a_E6a	KnownJunction	0	39.62	66.05	160.72	169.40	92.37	116.20	36.99
14	ER6a	ExonRegion	0	66.57	62.48	211.06	185.26	200.52	142.76	45.36
15	E6a_E7a	KnownJunction	0	58.11	50.52	209.91	155.31	175.78	150.99	40.07
16	ER7a	ExonRegion	0	64.40	54.46	212.16	153.90	141.89	142.40	46.65
17	E7a_E8a	KnownJunction	0	71.28	59.32	185.35	166.75	174.72	185.48	55.75
18	ER8a	ExonRegion	0	61.50	52.59	158.22	150.22	148.27	126.09	33.20
19	E8a_E9a	KnownJunction	0	44.75	59.08	146.89	164.17	115.70	230.67	39.01
20	ER9a	ExonRegion	0	115.79	69.25	234.03	195.52	346.73	234.82	51.96
21	E9a_E10a	KnownJunction	1	201.26	76.90	319.50	226.32	320.73	330.33	51.61
22	ER10a	ExonRegion	0	47.68	35.43	107.83	113.13	156.82	127.89	22.33
23	IG15_AR1	ActiveIntergenicRegion	0	3.05	0.00	1.30	1.89	20.21	0.24	2.19
24	IG15_SR2	SilentIntergenicRegion	0	1.91	0.16	2.35	1.25	11.10	0.00	3.90
25	IG15_SR3	SilentIntergenicRegion	0	0.36	2.15	1.75	0.02	12.20	0.00	1.12
26	IG15_AR2	ActiveIntergenicRegion	0	1.34	0.80	1.78	0.61	16.77	0.00	1.60
27	IG15_SR5	SilentIntergenicRegion	0	0.59	0.25	0.60	0.00	9.02	0.00	0.75
28	IG15_AR4	ActiveIntergenicRegion	0	0.98	0.39	1.62	0.00	10.59	0.00	1.29
29	IG15_AR7	ActiveIntergenicRegion	0	0.68	0.69	0.51	0.24	9.37	0.27	2.63
30	IG15_SR9	SilentIntergenicRegion	0	0.92	1.09	0.40	0.56	11.23	0.16	1.14