Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AMPD2	Gene	0	61.52	97.80	211.28	299.47	63.04	120.05	57.13
2	393689	Transcript	0	0	0	0	0	0	0	0
3	342115	Transcript	0	0	0	0	0	0	0	0
4	369843	Transcript	0	0.36	0.57	0.15	0.00	0.00	0.00	0.00
5	256578	Transcript	0	0	0	0	0	0	0	0
6	358729	Transcript	0	3.94	3.23	4.68	2.82	0.00	1.21	0.00
7	369840	Transcript	0	1.74	2.14	1.68	5.29	0.00	0.84	0.48
8	393688	Transcript	0	0	0	0	0	0	0	0
9	IG23	Intergenic	0	8.50	9.97	6.19	8.94	3.14	5.23	34.20
10	IG23_AR1	ActiveIntergenicRegion	0	8.82	12.07	5.60	10.04	3.67	2.21	38.75
11	IG23_SR1	SilentIntergenicRegion	0	13.06	12.84	8.86	7.31	3.11	4.59	41.47
12	IG23_AR2	ActiveIntergenicRegion	0	8.52	10.19	6.66	8.53	2.47	6.21	38.15
13	IG23_AR3	ActiveIntergenicRegion	0	5.41	9.48	2.40	8.76	3.48	4.74	35.71
14	IG23_SR3	SilentIntergenicRegion	0	14.03	10.82	9.06	14.33	5.34	5.96	48.81
15	IG23_AR4	ActiveIntergenicRegion	0	7.69	14.15	6.81	13.24	4.09	9.72	40.60
16	ER1a	ExonRegion	0	23.79	52.11	89.91	133.88	21.01	55.64	21.16
17	E1a_E3a	KnownJunction	0	19.96	50.78	96.93	142.17	10.33	60.25	21.74
18	E1a_E4c	NovelJunction	0	4.52	7.72	10.42	31.07	0.00	15.44	3.07
19	E1a_E5a	NovelJunction	1	2.37	1.13	4.15	19.40	0.00	4.61	0.89
20	ER2a	ExonRegion	0	4.16	8.76	16.03	28.24	0.95	17.69	1.60
21	E2_Ab	KnownBoundary	0	7.81	17.10	19.83	81.46	3.07	18.76	4.72
22	ER2b	ExonRegion	0	5.75	22.47	28.04	64.54	3.91	27.00	5.24
23	E2a_E3a	KnownJunction	0	4.92	29.21	19.30	49.44	2.10	25.78	2.21
24	E2a_E4c	KnownJunction	0	3.94	3.23	4.68	2.82	0.00	1.21	0.00
25	ER3a	ExonRegion	0	24.60	82.61	99.26	203.36	25.61	82.29	30.78
26	E3_Ab	NovelBoundary	0	19.79	44.48	64.28	107.80	8.83	47.73	15.82
27	E3a_E4c	KnownJunction	0	33.06	99.17	156.26	265.36	19.11	113.44	35.74
28	ER3b	ExonRegion	0	34.45	109.34	146.43	282.23	25.11	110.54	38.34
29	ER3c	ExonRegion	0	3.78	5.21	4.99	10.89	0.00	2.52	1.06
30	E3b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER4a	ExonRegion	0	1.44	1.21	0.05	4.99	0.00	0.00	0.39
32	E4_Ab	KnownBoundary	0	2.07	1.63	0.75	6.58	0.00	0.00	0.00
33	E4_Ac	KnownBoundary	0	4.87	0.00	5.71	1.68	0.00	0.00	2.22
34	ER4b	ExonRegion	0	5.89	5.85	8.93	18.10	0.99	4.77	3.07
35	ER4c	ExonRegion	0	30.50	100.20	116.96	277.63	28.16	102.13	29.98
36	E4a_E5a	KnownJunction	0	34.18	141.39	142.34	321.16	31.21	137.35	40.89
37	ER5a	ExonRegion	0	51.92	128.70	198.13	378.66	44.12	171.62	63.66
38	E5a_E6a	KnownJunction	0	60.50	95.21	226.02	398.32	46.11	179.50	74.37
39	ER6a	ExonRegion	0	57.10	115.77	233.54	386.00	38.31	149.37	56.89
40	E6a_E7a	KnownJunction	0	67.08	120.56	253.35	331.08	48.76	121.30	51.62
41	ER7a	ExonRegion	0	43.00	89.46	186.08	308.73	45.27	128.16	51.22
42	E7_Da	NovelBoundary	0	21.98	32.87	59.91	39.72	7.31	32.86	9.97
43	E7a_E8a	KnownJunction	1	22.48	61.42	178.91	305.34	41.15	88.84	45.34
44	E8_Aa	NovelBoundary	0	16.87	22.25	40.78	54.81	4.96	29.27	6.51
45	ER8a	ExonRegion	0	45.49	99.52	200.29	328.83	55.06	116.88	53.37
46	E8a_E9a	KnownJunction	0	52.17	105.06	167.07	325.91	56.39	117.06	39.50
47	ER9a	ExonRegion	0	59.02	151.18	237.94	444.03	66.07	149.87	67.14
48	E9a_E10a	KnownJunction	0	69.31	128.86	301.30	444.16	71.69	164.39	70.77
49	ER10a	ExonRegion	0	84.60	137.37	335.36	478.51	95.57	199.09	84.27
50	E10_Da	NovelBoundary	1	38.20	0.00	145.41	1.00	0.00	0.00	0.00
51	E10a_E11a	KnownJunction	0	108.17	131.62	422.53	494.14	139.33	172.22	104.32
52	ER11a	ExonRegion	0	106.17	173.73	411.32	505.95	107.10	197.35	116.49
53	E11_Da	NovelBoundary	0	30.41	31.81	56.16	35.60	6.57	14.85	14.20
54	E11a_E12a	KnownJunction	0	123.09	161.83	497.40	501.10	109.50	190.44	132.58
55	E12_Aa	NovelBoundary	0	37.37	29.66	62.65	48.63	9.59	34.65	14.63
56	ER12a	ExonRegion	0	103.94	185.67	493.73	529.00	138.31	183.75	109.45
57	E12_Da	NovelBoundary	0	28.66	20.65	67.34	53.23	4.15	14.04	13.27
58	E12a_E13a	KnownJunction	0	58.88	142.26	373.13	416.20	141.68	114.06	103.03
59	E12a_E14a	NovelJunction	1	32.73	25.96	48.96	149.00	3.87	67.11	14.58
60	E13_Aa	NovelBoundary	0	23.08	15.32	56.35	37.17	5.14	14.53	10.52
61	ER13a	ExonRegion	0	81.39	116.12	335.09	323.34	116.60	112.49	74.36
62	E13a_E14a	KnownJunction	0	98.35	79.81	343.49	293.42	104.66	116.04	72.62
63	I13	Intron	0	20.13	10.07	47.23	28.80	4.65	10.49	9.65
64	I13_AR1	ActiveIntronRegion	0	20.26	10.13	47.53	28.98	4.68	10.56	9.71
65	E14_Aa	NovelBoundary	0	42.89	10.72	105.52	60.90	1.18	18.20	30.63
66	ER14a	ExonRegion	0	206.96	166.00	483.92	567.20	171.12	231.89	112.41
67	E14a_E15a	KnownJunction	1	262.22	209.78	667.37	685.62	162.61	252.37	120.36
68	E15_Aa	NovelBoundary	1	27.81	2.78	43.89	15.74	0.97	2.52	6.13
69	ER15a	ExonRegion	0	259.06	208.73	668.01	652.71	190.31	259.18	153.03
70	E15_Da	NovelBoundary	1	45.93	14.29	78.79	26.90	3.87	2.20	7.50
71	E15a_E16a	KnownJunction	0	101.26	118.43	336.64	326.72	88.13	119.82	77.93
72	E15a_E17a	NovelJunction	1	24.55	36.99	42.84	122.59	1.01	58.08	6.52
73	I15	Intron	0	17.72	6.31	30.72	10.46	0.95	4.55	7.05
74	I15_SR1	SilentIntronRegion	0	18.65	7.24	34.60	11.79	1.11	4.78	7.81
75	ER16a	ExonRegion	0	91.41	114.47	312.66	300.83	112.53	108.49	86.95
76	E16a_E17a	KnownJunction	0	51.59	124.16	250.91	281.83	96.25	109.99	76.62
77	ER17a	ExonRegion	0	63.05	141.08	262.10	371.09	81.04	153.12	89.47
78	E17_Da	KnownBoundary	0	1.00	1.58	0.63	0.00	0.00	0.00	0.00
79	E17a_E18a	KnownJunction	0	60.72	129.65	234.02	364.19	54.08	144.67	76.00
80	E17a_E19a	NovelJunction	1	5.34	5.73	20.15	42.59	3.39	25.14	0.62
81	ER17b	ExonRegion	0	0.72	1.14	0.31	0.00	0.00	0.00	0.00
82	E17b_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
83	ER18a	ExonRegion	0	50.37	121.68	209.40	384.21	79.79	145.44	71.14
84	E18a_E19a	KnownJunction	0	68.46	120.38	262.00	344.82	135.46	130.43	77.17
85	ER19a	ExonRegion	0	87.01	128.22	269.88	412.93	93.48	164.18	82.19
86	E19_Da	KnownBoundary	0	49.82	107.40	151.33	360.09	31.97	161.95	46.59
87	ER19b	ExonRegion	0	27.54	75.90	104.48	261.73	30.78	132.79	36.35
88	ER19c	ExonRegion	0	3.07	9.42	8.13	6.86	3.44	8.28	3.04