Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FUBP1	Gene	0	375.40	622.79	361.15	901.68	687.52	495.80	203.28
2	370768	Transcript	0	0	0	0	0	0	0	0
3	394922	Transcript	0	0	0	0	0	0	0	0
4	370773	Transcript	0	62.45	207.97	87.04	271.48	172.55	155.98	53.95
5	294623	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	370767	Transcript	1	80.69	31.97	47.05	32.95	32.55	22.41	7.65
7	IG2	Intergenic	0	5.09	2.83	5.35	3.45	15.02	2.71	6.60
8	IG2_AR16	ActiveIntergenicRegion	0	8.89	16.84	8.45	19.89	26.69	18.10	7.43
9	IG2_SR12	SilentIntergenicRegion	0	7.99	3.16	4.93	4.45	31.49	2.36	9.79
10	IG2_AR15	ActiveIntergenicRegion	0	6.68	24.57	15.98	25.17	13.56	16.83	7.08
11	IG2_SR11	SilentIntergenicRegion	0	3.68	0.90	4.27	1.07	11.62	0.99	4.60
12	IG2_AR14	ActiveIntergenicRegion	0	4.89	0.93	3.34	0.57	14.63	1.13	7.71
13	IG2_SR10	SilentIntergenicRegion	0	4.12	0.94	3.66	1.53	14.97	0.40	6.37
14	IG2_AR13	ActiveIntergenicRegion	0	1.40	0.00	2.59	0.49	7.60	0.48	3.06
15	IG2_AR12	ActiveIntergenicRegion	0	0.90	1.21	0.29	0.00	13.10	1.23	2.34
16	IG2_SR9	SilentIntergenicRegion	0	3.82	0.91	2.57	1.06	13.81	0.93	4.27
17	IG2_AR11	ActiveIntergenicRegion	0	6.88	0.61	3.26	0.63	11.21	0.31	4.29
18	IG2_SR8	SilentIntergenicRegion	0	2.25	0.53	2.56	1.31	10.98	0.51	4.39
19	IG2_AR10	ActiveIntergenicRegion	0	6.21	3.17	3.02	3.04	18.17	3.72	7.02
20	IG2_SR7	SilentIntergenicRegion	0	2.41	0.61	2.87	1.98	8.47	1.94	4.67
21	IG2_SR6	SilentIntergenicRegion	0	2.50	1.87	3.70	1.48	13.23	1.82	4.60
22	IG2_AR8	ActiveIntergenicRegion	0	4.06	2.74	5.39	2.32	16.69	1.40	9.92
23	IG2_SR5	SilentIntergenicRegion	0	5.37	2.39	6.81	3.37	18.55	2.00	8.95
24	IG2_AR7	ActiveIntergenicRegion	0	5.64	1.15	5.52	2.36	14.41	0.00	7.33
25	IG2_SR4	SilentIntergenicRegion	0	5.06	0.78	4.74	2.50	11.83	1.49	5.32
26	IG2_AR5	ActiveIntergenicRegion	0	7.49	3.22	6.50	4.94	20.47	2.60	8.93
27	IG2_SR3	SilentIntergenicRegion	0	7.17	2.61	5.55	3.57	15.87	2.52	6.57
28	IG2_AR4	ActiveIntergenicRegion	0	7.51	1.78	3.65	0.00	9.90	0.61	5.39
29	IG2_AR3	ActiveIntergenicRegion	0	8.62	0.58	3.04	0.00	10.79	0.75	4.63
30	IG2_SR2	SilentIntergenicRegion	0	11.42	2.80	8.52	2.45	17.77	2.52	3.00
31	IG2_AR2	ActiveIntergenicRegion	0	16.27	5.67	12.19	4.99	13.90	4.90	1.35
32	IG2_SR1	SilentIntergenicRegion	0	15.84	5.29	11.40	3.84	16.47	5.41	4.67
33	IG2_AR1	ActiveIntergenicRegion	0	11.37	8.25	11.97	7.96	25.48	14.23	11.53
34	ER1a	ExonRegion	0	5.38	20.05	6.77	39.28	20.25	36.78	3.37
35	ER1b	ExonRegion	0	76.99	322.57	88.48	457.01	178.67	251.18	87.14
36	E1a_E2a	KnownJunction	0	221.86	678.41	245.57	1028.54	258.95	589.46	235.61
37	ER2a	ExonRegion	0	405.87	807.76	416.16	1192.05	727.92	608.08	256.29
38	E2a_E3a	KnownJunction	0	300.45	673.99	324.37	864.86	1121.08	393.77	165.27
39	ER3a	ExonRegion	0	365.66	1047.49	393.49	1352.70	974.65	656.10	251.17
40	E3a_E4a	KnownJunction	0	257.91	877.65	282.36	1187.67	773.10	643.49	201.17
41	ER4a	ExonRegion	0	375.34	1195.84	451.02	1577.91	712.95	804.19	315.42
42	E4a_E5a	KnownJunction	0	95.05	250.76	96.53	383.45	214.02	153.43	98.63
43	E4a_E5b	KnownJunction	0	187.28	623.47	257.96	805.36	512.53	462.62	158.79
44	ER5a	ExonRegion	0	196.14	576.45	222.01	764.39	369.90	355.54	173.20
45	ER5b	ExonRegion	0	429.24	1231.37	527.79	1505.01	881.70	808.91	320.71
46	E5a_E6a	KnownJunction	0	415.30	1131.06	499.44	1258.79	1010.52	737.74	243.83
47	ER6a	ExonRegion	0	501.03	1226.08	529.06	1440.99	1062.13	793.54	316.32
48	E6a_E7a	KnownJunction	0	528.80	1060.76	519.80	1336.02	1143.44	720.43	318.60
49	ER7a	ExonRegion	0	597.23	1160.25	598.47	1481.41	1324.11	808.48	366.98
50	E7a_E8a	KnownJunction	0	547.90	1185.03	552.22	1531.76	1221.64	883.19	343.68
51	ER8a	ExonRegion	0	590.47	1268.77	595.06	1789.46	1105.54	939.13	348.57
52	E8a_E9a	KnownJunction	0	688.68	1187.31	642.27	1974.53	1457.56	979.00	330.24
53	ER9a	ExonRegion	0	581.20	965.80	583.22	1477.61	1266.92	718.95	305.73
54	E9a_E10a	KnownJunction	0	529.24	868.32	532.44	1377.91	1212.76	569.52	261.59
55	ER10a	ExonRegion	0	800.58	1063.92	687.43	1536.60	1411.48	725.79	347.01
56	E10a_E11a	KnownJunction	0	875.39	1225.83	785.02	1811.15	1595.81	829.61	379.22
57	ER11a	ExonRegion	0	881.20	1298.56	798.15	1807.61	1476.88	901.69	403.52
58	E11a_E12a	KnownJunction	0	1039.77	1255.01	820.68	1766.50	1426.79	935.71	426.49
59	ER12a	ExonRegion	0	675.29	992.67	612.99	1383.87	1562.04	718.70	348.00
60	E12a_E13a	KnownJunction	0	464.28	755.15	493.23	1105.83	1262.42	613.07	278.04
61	ER13a	ExonRegion	0	587.20	887.20	612.18	1246.85	1192.71	692.40	340.97
62	E13a_E14a	KnownJunction	0	536.40	1083.91	606.34	1650.71	1020.48	921.16	339.47
63	ER14a	ExonRegion	0	606.30	1013.82	684.30	1487.70	1150.50	831.59	362.94
64	E14a_E15a	KnownJunction	0	363.99	640.55	321.25	950.44	451.97	572.28	162.48
65	ER15a	ExonRegion	0	390.08	609.23	397.94	952.75	687.25	546.01	225.32
66	E15a_E16a	KnownJunction	0	322.48	736.62	337.33	1161.12	603.09	782.98	260.06
67	ER16a	ExonRegion	0	269.96	759.82	258.57	1123.98	564.57	662.71	188.60
68	E16a_E17a	KnownJunction	0	272.33	732.34	255.48	1057.91	466.06	556.55	189.12
69	ER17a	ExonRegion	0	312.64	771.85	357.33	1212.90	766.75	697.14	263.66
70	E17a_E18a	KnownJunction	0	0.00	1.60	1.58	0.00	1.11	0.00	0.00
71	E17a_E18b	KnownJunction	0	271.41	685.58	267.23	1050.11	613.27	613.82	208.91
72	E18_Ab	NovelBoundary	1	115.03	16.63	114.19	20.02	6.78	5.57	5.23
73	ER18a	ExonRegion	0	80.11	191.34	75.87	303.95	183.23	193.40	60.38
74	ER18b	ExonRegion	0	267.83	680.34	255.85	1011.56	654.48	639.41	205.91
75	E18a_E19a	KnownJunction	0	249.08	609.63	228.24	905.01	719.92	508.95	174.93
76	I18_SR4	SilentIntronRegion	0	104.65	33.26	62.77	28.32	25.68	10.96	11.23
77	ER19a	ExonRegion	0	322.42	644.66	336.71	1010.05	674.36	648.62	222.32
78	E19a_E20a	KnownJunction	0	3.14	2.76	0.89	0.00	2.86	3.06	0.00
79	E19a_E20b	KnownJunction	0	202.35	383.17	184.26	659.18	441.12	407.57	131.85
80	E19a_E21a	KnownJunction	0	0.00	0.00	2.11	6.20	3.30	4.56	1.78
81	E20_Aa	NovelBoundary	1	206.50	58.06	125.48	45.92	92.19	43.79	31.14
82	ER20a	ExonRegion	1	158.24	61.18	93.20	65.90	62.23	41.77	15.31
83	E20_Ab	KnownBoundary	1	139.03	48.97	89.79	59.25	44.08	37.39	17.76
84	ER20b	ExonRegion	0	296.36	225.08	232.81	418.81	396.73	288.87	104.15
85	E20_Da	KnownBoundary	0	185.96	106.92	119.12	140.82	173.80	88.68	42.19
86	ER20c	ExonRegion	1	166.41	84.06	119.20	137.36	157.99	71.46	44.63
87	E20_Db	NovelBoundary	0	163.46	96.73	98.93	126.65	134.01	67.94	38.88
88	I20	Intron	0	90.47	49.53	72.20	78.76	116.15	34.51	24.50
89	I20_AR1	ActiveIntronRegion	0	90.93	49.79	72.57	79.17	116.75	34.70	24.63
90	ER21a	ExonRegion	0	0.06	0.44	1.04	2.88	1.83	0.75	1.28
91	I21	Intron	0	141.78	76.88	108.72	136.26	127.61	78.91	35.21
92	I21_AR1	ActiveIntronRegion	0	141.86	76.92	108.78	136.33	127.68	78.95	35.23
93	ER22a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00