Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RPAP2	Gene	0	37.85	21.42	59.70	22.92	57.93	23.85	39.69
2	394482	Transcript	1	1.16	0.97	0.26	2.81	1.84	10.92	1.32
3	370343	Transcript	0	24.16	16.24	57.81	17.85	64.33	25.75	47.07
4	ER1a	ExonRegion	0	9.87	10.43	15.13	13.02	1.71	7.23	6.08
5	E1a_E2a	KnownJunction	0	6.13	9.41	12.06	5.82	3.02	5.25	3.91
6	ER2a	ExonRegion	0	3.86	10.09	8.22	11.74	4.88	10.23	4.77
7	E2a_E3a	KnownJunction	0	2.07	17.47	5.12	16.96	6.69	16.19	5.53
8	ER3a	ExonRegion	0	16.52	23.15	38.50	22.87	20.21	33.10	23.11
9	E3a_E4a	KnownJunction	0	28.61	19.07	55.47	23.52	48.39	39.56	35.61
10	ER4a	ExonRegion	0	38.03	39.22	54.85	24.64	49.45	45.52	33.48
11	E4a_E5a	KnownJunction	0	45.08	36.36	63.00	24.03	32.74	43.60	32.89
12	ER5a	ExonRegion	0	71.35	42.56	108.20	39.98	77.61	45.96	49.73
13	E5a_E6a	KnownJunction	0	110.60	42.14	149.05	45.30	119.60	52.74	67.53
14	E5a_E7a	NovelJunction	1	0.77	1.63	0.73	0.00	0.00	8.31	0.00
15	ER6a	ExonRegion	0	83.34	38.34	107.50	42.24	105.34	39.59	64.58
16	E6a_E7a	KnownJunction	0	41.32	21.94	64.94	30.91	111.99	21.76	50.27
17	I6_AR2	ActiveIntronRegion	1	2.91	1.67	1.88	1.65	1.99	0.20	9.21
18	ER7a	ExonRegion	0	71.02	44.07	112.01	31.35	108.88	29.56	64.29
19	E7a_E8a	KnownJunction	1	71.25	49.08	117.89	21.24	90.32	31.46	54.90
20	ER8a	ExonRegion	0	68.24	35.89	96.03	36.52	94.92	32.25	63.32
21	E8_Da	NovelBoundary	0	11.87	17.97	15.10	15.50	7.68	10.10	9.97
22	E8a_E9a	KnownJunction	0	37.35	18.18	78.58	24.17	105.97	13.56	49.86
23	I8_AR1	ActiveIntronRegion	0	7.15	9.53	6.29	5.60	3.32	9.04	7.30
24	ER9a	ExonRegion	0	38.30	17.89	79.33	23.20	95.24	24.49	51.98
25	E9a_E10a	KnownJunction	0	57.26	19.13	102.81	29.66	88.66	34.22	71.63
26	ER10a	ExonRegion	0	53.71	17.28	91.02	34.21	104.03	34.86	68.04
27	E10_Da	NovelBoundary	1	12.95	0.00	14.33	0.00	4.47	0.00	2.04
28	E10a_E11a	KnownJunction	0	40.26	19.97	72.63	32.51	100.46	41.19	49.83
29	E11_Aa	NovelBoundary	0	15.12	7.99	37.36	13.38	37.23	20.34	24.05
30	ER11a	ExonRegion	0	37.40	18.61	70.97	30.60	106.14	37.42	50.48
31	E11a_E12a	KnownJunction	1	1.79	1.42	0.00	4.44	2.05	13.56	1.49
32	E11a_E13a	KnownJunction	0	27.82	9.41	64.62	19.18	91.40	16.37	50.58
33	I11	Intron	1	3.50	2.44	4.27	2.13	5.61	1.92	8.50
34	I11_AR1	ActiveIntronRegion	1	3.24	2.66	2.61	0.64	6.80	1.10	8.71
35	I11_SR2	SilentIntronRegion	1	2.71	2.16	2.23	0.86	5.89	1.23	8.83
36	I11_AR2	ActiveIntronRegion	1	3.20	2.05	3.62	1.09	7.38	0.95	9.33
37	I11_AR4	ActiveIntronRegion	1	12.50	7.53	16.59	9.15	12.62	5.50	15.35
38	I11_AR5	ActiveIntronRegion	1	5.57	2.09	11.00	3.99	4.88	2.99	8.13
39	I11_SR6	SilentIntronRegion	1	3.99	3.27	6.52	4.45	3.77	5.00	9.11
40	E12_Aa	NovelBoundary	1	14.05	11.17	11.08	36.79	4.03	10.18	18.67
41	ER12a	ExonRegion	1	0.54	0.51	0.52	1.17	1.62	8.28	1.16
42	E12_Da	NovelBoundary	1	143.27	53.23	84.22	50.90	13.51	23.77	77.78
43	I12_SR1	SilentIntronRegion	1	5.45	5.10	7.15	4.36	5.78	4.45	8.26
44	I12_AR1	ActiveIntronRegion	1	11.67	9.82	12.85	12.34	15.34	7.10	21.46
45	I12_SR2	SilentIntronRegion	1	5.43	6.83	7.17	5.89	9.00	5.46	12.01
46	I12_AR2	ActiveIntronRegion	1	5.61	3.33	4.40	4.30	5.61	3.47	8.21
47	I12_SR3	SilentIntronRegion	1	2.41	4.12	3.89	0.49	3.69	0.98	8.66
48	ER13a	ExonRegion	0	34.36	20.65	72.25	22.46	92.76	40.34	63.34
49	E13a_E14a	KnownJunction	1	20.18	26.61	66.06	19.29	49.98	35.51	54.86
50	ER14a	ExonRegion	0	14.30	8.28	28.29	10.46	23.17	10.77	19.52
51	IG13	Intergenic	0	7.01	4.34	9.84	4.46	5.93	5.48	6.79
52	IG13_AR1	ActiveIntergenicRegion	0	8.53	5.49	13.02	4.67	6.75	6.43	6.41
53	IG13_SR2	SilentIntergenicRegion	0	9.03	2.78	13.23	7.52	6.79	9.19	11.05
54	IG13_AR2	ActiveIntergenicRegion	0	7.30	3.33	5.57	4.22	5.39	4.26	8.85