Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 C1orf190 Gene 0 1.01 2.81 8.02 8.18 17.62 3.82 13.66 2 371980 Transcript 0 0 0 0 0 0 0 0 3 307185 Transcript 0 0.13 0.19 2.88 5.46 6.48 2.12 6.96 4 ER1a ExonRegion 0 0.00 2.71 3.35 8.12 6.01 2.47 8.01 5 E1_Da NovelBoundary 0 0.00 0.00 0.66 1.16 3.25 4.98 9.85 6 E1a_E2a KnownJunction 0 0.00 4.31 20.15 14.60 9.52 8.47 19.45 7 ER2a ExonRegion 0 1.31 3.20 9.27 7.86 20.59 4.04 14.79 8 E2_Da KnownBoundary 0 0.00 1.00 6.45 13.68 14.80 2.44 19.39 9 ER2b ExonRegion 0 0.26 0.37 5.75 10.92 12.95 4.24 13.91 10 E2_Db NovelBoundary 0 0.00 5.57 2.39 6.75 15.77 7.16 10.10 11 I2 Intron 0 0.38 1.28 4.33 3.94 8.36 2.71 11.02 12 I2_SR1 SilentIntronRegion 0 0.56 1.95 9.21 6.21 16.48 4.22 21.38 13 I2_AR1 ActiveIntronRegion 0 0.00 1.00 5.45 8.24 14.15 1.23 16.45 14 I2_AR2 ActiveIntronRegion 0 0.68 1.94 6.00 7.35 13.34 4.30 18.80 15 I2_SR2 SilentIntronRegion 0 0.24 0.54 3.28 3.15 6.15 1.99 8.56 16 I2_SR3 SilentIntronRegion 0 0.14 1.35 4.32 2.52 9.52 1.80 9.35 17 I2_AR5 ActiveIntronRegion 0 0.35 0.92 4.54 4.38 15.04 2.62 16.72 18 Ix Intron 0 1.87 5.61 1.48 10.24 0.41 11.17 0.79 19 Ix_SR1 SilentIntronRegion 0 1.90 5.75 1.52 10.49 0.42 11.41 0.81 20 Ix Intron 0 1.93 5.17 2.25 12.46 0.94 18.52 1.43 21 Ix_SR1 SilentIntronRegion 0 1.93 4.21 2.00 10.88 0.91 16.62 1.00 22 Ix_AR1 ActiveIntronRegion 0 1.90 10.14 3.60 20.61 1.33 28.40 4.04 23 Ix_SR2 SilentIntronRegion 0 1.91 11.02 3.55 22.35 0.15 30.08 2.64 24 Ix Intron 0 2.35 8.62 4.39 30.83 2.12 40.34 3.28 25 Ix_SR1 SilentIntronRegion 0 2.35 8.63 4.40 30.90 2.12 40.43 3.29 26 Ix Intron 0 4.97 24.61 9.91 62.95 8.18 73.05 6.25 27 Ix_SR1 SilentIntronRegion 0 5.01 24.81 10.00 63.49 8.26 73.69 6.31 28 Ix Intron 0 1.52 14.42 5.32 32.88 3.90 60.44 4.86 29 Ix_SR1 SilentIntronRegion 0 1.70 16.74 6.05 37.56 4.64 71.38 5.98 30 Ix_AR1 ActiveIntronRegion 0 1.14 9.13 3.69 22.41 2.14 34.80 2.22 31 Ix Intron 0 1.59 9.62 6.65 32.52 1.51 40.46 2.33 32 Ix_SR1 SilentIntronRegion 0 2.00 12.10 8.36 40.84 1.89 50.85 2.93 33 Ix Intron 0 3.81 9.36 2.05 12.53 1.31 15.47 2.88 34 Ix_SR1 SilentIntronRegion 0 3.83 9.40 2.05 12.58 1.32 15.53 2.90 35 Ix Intron 0 3.02 7.23 3.02 13.29 12.60 18.91 5.34 36 Ix_AR1 ActiveIntronRegion 0 4.63 7.21 3.17 17.40 13.04 21.61 7.01 37 Ix_SR1 SilentIntronRegion 0 1.29 7.32 2.90 8.94 12.22 16.18 3.57 38 Ix Intron 0 4.93 15.54 6.27 29.14 1.93 39.62 5.55 39 Ix_SR1 SilentIntronRegion 0 5.05 19.05 7.67 32.30 2.53 45.56 6.38 40 Ix_SR2 SilentIntronRegion 0 5.16 11.12 5.03 26.49 1.16 34.14 4.29 41 Ix_AR2 ActiveIntronRegion 0 3.79 11.86 3.31 22.23 1.33 27.85 5.35 42 Ix Intron 0 1.77 10.53 1.41 23.04 5.36 37.47 9.74 43 Ix_AR1 ActiveIntronRegion 0 1.79 10.68 1.43 23.33 5.44 37.95 9.87 44 Ix Intron 0 6.49 18.04 6.58 40.09 9.09 48.51 9.35 45 Ix_AR1 ActiveIntronRegion 0 6.57 18.23 6.67 40.62 9.22 49.15 9.47 46 Ix Intron 0 2.88 12.12 6.63 21.18 5.76 35.19 5.15 47 Ix_AR1 ActiveIntronRegion 0 3.73 16.55 8.48 26.96 7.30 47.29 7.34 48 Ix Intron 0 2.02 9.30 5.98 25.85 0.80 34.80 4.14 49 Ix_SR1 SilentIntronRegion 0 0.17 0.13 1.28 6.37 0.00 16.21 0.45 50 Ix_SR2 SilentIntronRegion 0 2.11 9.71 6.20 26.79 0.84 35.71 4.30 51 Ix Intron 0 4.05 13.46 7.22 24.33 2.31 28.97 7.44 52 Ix_SR1 SilentIntronRegion 0 4.38 14.21 7.12 30.22 2.66 36.04 8.85 53 Ix_AR1 ActiveIntronRegion 0 5.57 9.52 3.96 10.70 1.45 21.40 5.01 54 Ix_AR2 ActiveIntronRegion 0 3.18 18.16 13.60 33.44 3.22 27.99 9.14 55 Ix Intron 0 0.62 6.09 3.54 17.46 2.71 14.08 6.66 56 Ix_AR1 ActiveIntronRegion 0 0.63 6.21 3.58 17.71 2.77 14.27 6.78 57 Ix_AR4 ActiveIntronRegion 0 1.29 8.39 7.66 10.75 35.35 12.21 8.61 58 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00