Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	EPS15	Gene	0	96.24	54.51	117.35	30.40	162.21	40.07	153.06
2	371733	Transcript	0	5.66	2.51	4.11	1.88	6.47	0.02	3.32
3	371727	Transcript	0	6.17	2.79	4.87	1.07	2.64	0.62	3.07
4	371730	Transcript	0	0	0	0	0	0	0	0
5	396122	Transcript	0	0	0	0	0	0	0	0
6	396118	Transcript	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	5.66	2.51	4.11	1.88	6.47	0.02	3.32
8	E1_Ab	KnownBoundary	0	6.44	0.00	5.60	0.00	5.81	0.00	4.92
9	E1_Ac	KnownBoundary	0	18.59	10.69	14.43	6.18	11.07	2.73	11.95
10	ER1b	ExonRegion	1	30.16	15.49	29.47	9.35	25.92	3.06	31.37
11	ER1c	ExonRegion	0	60.69	30.08	61.74	16.21	44.97	11.06	66.78
12	E1a_E3b	KnownJunction	0	79.43	38.15	83.03	21.43	50.83	17.07	102.61
13	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	5.74	2.59	5.74	1.25	5.67	1.31	5.85
15	ER3b	ExonRegion	0	75.10	39.65	79.30	21.87	68.19	22.04	81.08
16	E3a_E4a	KnownJunction	0	55.19	30.24	52.42	16.58	76.65	18.14	50.80
17	ER4a	ExonRegion	0	125.17	78.01	124.19	35.08	60.76	37.77	104.03
18	E4a_E5a	KnownJunction	0	185.73	94.71	196.30	33.81	64.04	45.45	142.02
19	ER5a	ExonRegion	0	179.51	101.64	188.26	39.07	138.72	45.72	165.30
20	E5a_E6a	KnownJunction	0	115.98	76.42	120.18	37.17	231.77	44.03	122.30
21	ER6a	ExonRegion	0	152.78	109.93	152.87	45.63	181.83	56.14	141.29
22	E6a_E7a	KnownJunction	0	180.50	103.61	160.49	44.92	178.68	42.61	134.93
23	ER7a	ExonRegion	0	231.17	116.53	202.87	61.38	191.43	67.11	184.86
24	E7a_E8a	KnownJunction	0	279.61	127.68	244.73	62.91	207.91	88.73	210.87
25	ER8a	ExonRegion	0	272.94	126.58	256.64	59.06	219.79	81.25	228.54
26	E8a_E9a	KnownJunction	0	171.54	86.22	158.96	38.90	181.01	52.85	177.44
27	ER9a	ExonRegion	0	188.16	80.48	165.93	37.68	217.09	51.88	167.69
28	E9a_E10a	KnownJunction	0	2.65	2.60	0.00	0.00	0.97	0.00	1.35
29	E9a_E11a	KnownJunction	0	173.39	68.88	172.72	34.16	174.92	48.45	153.66
30	E9a_E12a	NovelJunction	0	14.69	9.90	15.63	3.33	8.81	4.21	5.36
31	E10_Aa	NovelBoundary	1	15.54	14.16	16.83	21.89	16.83	5.95	11.95
32	ER10a	ExonRegion	0	9.68	2.99	9.74	2.14	4.30	1.23	4.79
33	ER11a	ExonRegion	0	179.93	70.53	181.92	36.91	209.39	54.30	197.51
34	E11_Da	NovelBoundary	0	21.98	11.03	24.39	12.54	17.66	3.06	14.30
35	E11a_E12a	KnownJunction	0	187.58	70.28	173.12	37.41	177.83	51.56	203.66
36	I11_AR1	ActiveIntronRegion	0	10.41	3.95	18.19	11.37	12.32	6.66	6.05
37	E12_Aa	NovelBoundary	1	33.80	9.43	29.34	10.81	4.47	3.32	4.14
38	ER12a	ExonRegion	0	249.61	116.80	261.46	53.95	234.96	82.46	250.95
39	E12a_E13a	KnownJunction	0	179.05	128.49	205.15	49.74	198.51	82.14	217.31
40	ER13a	ExonRegion	0	138.43	129.25	192.61	51.98	169.71	66.28	227.73
41	E13a_E14a	KnownJunction	0	143.38	98.07	199.50	56.95	189.43	50.49	252.23
42	E13a_E15a	NovelJunction	0	2.77	7.70	0.00	1.03	0.00	1.10	0.00
43	ER14a	ExonRegion	0	128.01	108.59	173.33	58.49	145.26	64.79	258.20
44	E14a_E15a	KnownJunction	0	99.07	112.15	135.30	41.12	94.42	54.06	199.89
45	E15_Aa	NovelBoundary	0	3.27	2.68	5.48	1.30	68.90	1.50	4.94
46	ER15a	ExonRegion	0	105.72	119.90	165.91	51.98	146.57	54.11	245.07
47	E15a_E16a	KnownJunction	0	136.09	125.42	186.44	69.00	180.32	79.35	319.88
48	ER16a	ExonRegion	0	124.80	111.29	153.01	51.41	216.35	63.21	217.08
49	E16a_E17a	KnownJunction	0	137.27	109.74	167.29	54.10	190.90	53.04	210.57
50	E16a_E19a	KnownJunction	0	0.00	0.00	0.00	1.11	0.00	0.00	0.00
51	ER17a	ExonRegion	0	149.84	103.05	193.94	70.73	270.08	76.09	231.21
52	E17a_E18a	KnownJunction	0	110.64	79.23	171.27	56.02	223.98	69.22	218.71
53	ER18a	ExonRegion	0	120.45	98.62	197.95	58.44	320.94	60.88	291.44
54	E18a_E19a	KnownJunction	0	114.06	92.97	206.62	45.27	267.41	69.12	264.06
55	ER19a	ExonRegion	0	149.13	114.47	222.44	71.36	346.82	73.54	336.83
56	E19a_E20a	KnownJunction	0	143.42	115.59	237.38	65.10	391.92	84.12	344.37
57	ER20a	ExonRegion	0	141.51	94.09	223.77	51.30	445.72	82.86	371.66
58	E20_Da	NovelBoundary	0	17.11	2.47	26.34	10.54	12.59	6.49	0.89
59	E20a_E21a	KnownJunction	0	99.14	59.16	139.55	29.29	473.71	57.38	282.67
60	I20_AR1	ActiveIntronRegion	1	11.74	4.34	22.78	9.83	11.06	1.76	3.14
61	ER21a	ExonRegion	0	182.95	94.49	208.95	53.97	461.28	72.54	428.72
62	E21a_E22a	KnownJunction	0	190.93	102.33	205.05	62.20	399.18	66.36	382.61
63	ER22a	ExonRegion	0	145.44	122.48	218.64	69.81	395.04	72.47	430.23
64	E22a_E23a	KnownJunction	1	125.29	116.86	205.41	68.95	476.39	79.51	455.91
65	ER23a	ExonRegion	0	189.10	122.92	271.54	64.88	521.31	89.31	568.03
66	E23a_E24a	KnownJunction	0	174.83	104.74	243.07	57.35	416.91	86.56	464.72
67	ER24a	ExonRegion	0	131.32	117.21	197.97	57.04	370.49	69.21	395.70
68	E24a_E25a	KnownJunction	0	109.62	124.40	189.86	43.29	524.87	61.53	355.55
69	E25_Aa	NovelBoundary	1	48.12	4.39	82.99	1.68	0.00	0.00	1.38
70	ER25a	ExonRegion	0	131.08	112.84	206.87	47.61	357.37	90.97	411.16
71	E25a_E26a	KnownJunction	0	107.25	71.17	112.72	24.60	228.82	49.69	215.09
72	ER26a	ExonRegion	0	134.92	97.51	182.09	53.96	307.48	61.62	303.42
73	E26a_E27a	KnownJunction	0	131.22	76.45	132.54	56.89	287.95	46.98	226.85
74	I26_AR1	ActiveIntronRegion	1	7.99	2.43	10.77	9.85	11.54	1.23	5.63
75	ER27a	ExonRegion	0	83.04	30.31	96.49	21.48	142.12	33.43	110.29