Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DDEFL1	Gene	0	40.63	31.58	12.54	7.47	135.39	14.01	50.42
2	374579	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	336689	Transcript	0	37.81	30.12	11.37	7.25	134.14	11.78	51.67
4	ER1a	ExonRegion	0	1.02	3.35	0.35	0.09	4.16	0.95	2.10
5	E1a_E2a	KnownJunction	0	6.66	11.38	1.29	1.22	7.19	6.11	6.75
6	ER2a	ExonRegion	0	11.63	23.48	5.52	5.14	26.23	11.94	21.29
7	E2a_E3a	KnownJunction	0	14.17	22.02	6.16	10.35	37.09	17.29	29.01
8	ER3a	ExonRegion	0	15.22	31.30	5.67	7.43	49.17	11.02	32.09
9	E3a_E4a	KnownJunction	0	17.61	28.90	15.26	5.50	68.14	14.36	33.84
10	ER4a	ExonRegion	0	20.13	29.12	12.92	5.67	72.99	13.71	44.33
11	E4a_E5a	KnownJunction	1	15.32	12.51	8.74	1.16	82.32	9.97	43.34
12	ER5a	ExonRegion	0	17.26	20.46	10.73	3.39	102.72	7.60	38.18
13	E5a_E6a	KnownJunction	1	21.90	22.23	8.02	4.42	104.41	2.81	24.56
14	ER6a	ExonRegion	0	20.43	22.49	12.28	4.33	86.21	11.47	29.82
15	E6_Da	KnownBoundary	1	16.56	22.46	15.42	4.98	75.11	17.82	37.68
16	E6a_E23b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER6b	ExonRegion	1	12.72	27.16	12.39	5.66	80.75	17.50	43.59
18	E6b_E7a	KnownJunction	1	10.97	30.82	8.64	6.15	87.90	14.26	43.31
19	ER7a	ExonRegion	0	16.78	24.33	11.14	2.84	92.49	10.49	36.91
20	E7a_E8a	KnownJunction	0	23.63	19.65	4.70	3.44	79.65	11.52	29.88
21	E7a_E9a	NovelJunction	1	0.00	1.52	3.84	0.00	1.08	11.34	2.35
22	ER8a	ExonRegion	0	24.12	33.01	4.89	6.14	104.06	7.31	33.94
23	E8a_E9a	KnownJunction	1	34.48	29.53	6.29	6.58	96.61	4.58	30.97
24	ER9a	ExonRegion	0	39.86	28.72	10.49	5.03	191.52	8.60	49.83
25	E9a_E10a	KnownJunction	0	58.11	29.11	10.26	4.23	242.68	18.55	70.81
26	ER10a	ExonRegion	0	98.65	52.57	20.92	11.14	245.91	19.54	85.72
27	E10a_E11a	KnownJunction	0	89.16	62.42	25.02	8.78	196.09	14.85	87.65
28	E10a_E12a	NovelJunction	1	1.03	2.08	1.52	0.00	4.10	11.01	3.14
29	ER11a	ExonRegion	0	86.93	52.81	19.22	8.84	282.37	13.70	109.48
30	E11a_E12a	KnownJunction	0	74.32	32.63	11.98	6.26	226.59	11.01	87.82
31	ER12a	ExonRegion	0	51.13	33.64	8.89	4.22	188.89	9.70	55.44
32	E12a_E13a	KnownJunction	0	27.07	28.85	9.02	5.39	142.65	5.39	33.95
33	ER13a	ExonRegion	1	24.39	29.31	10.81	2.60	125.03	4.70	42.39
34	E13a_E14a	KnownJunction	0	21.48	23.46	9.25	1.30	112.75	4.21	34.65
35	ER14a	ExonRegion	0	18.21	22.64	5.44	2.67	77.92	4.19	32.37
36	E14a_E15a	KnownJunction	1	26.10	14.55	7.52	6.45	86.08	1.13	30.11
37	ER15a	ExonRegion	0	28.25	20.15	5.77	8.41	80.66	7.13	25.58
38	E15a_E16a	KnownJunction	0	36.32	20.44	8.16	7.61	97.88	11.58	43.62
39	ER16a	ExonRegion	0	39.53	27.39	8.32	7.99	118.67	9.51	49.83
40	E16a_E17a	KnownJunction	1	37.85	33.00	12.99	10.97	113.97	5.36	42.29
41	ER17a	ExonRegion	0	29.77	29.52	11.52	7.96	133.23	14.43	49.36
42	E17_Da	NovelBoundary	0	17.69	14.48	9.94	5.42	27.80	3.19	7.41
43	E17a_E18a	KnownJunction	1	12.93	17.63	6.06	1.08	145.60	8.66	39.17
44	I17_AR1	ActiveIntronRegion	0	7.65	8.45	4.72	0.00	16.20	2.35	2.58
45	ER18a	ExonRegion	0	26.25	30.85	9.48	11.40	141.98	14.21	56.93
46	E18a_E19a	KnownJunction	0	34.63	46.26	10.81	19.88	179.58	21.20	72.35
47	ER19a	ExonRegion	0	31.84	38.30	10.89	9.79	154.63	22.15	73.36
48	E19a_E20a	KnownJunction	0	23.67	33.26	8.08	7.48	144.79	19.59	60.95
49	ER20a	ExonRegion	0	34.62	32.71	13.36	10.29	163.82	15.32	68.23
50	E20a_E21a	KnownJunction	0	39.30	31.66	16.11	9.54	153.23	10.61	66.73
51	ER21a	ExonRegion	0	31.83	15.88	10.05	5.39	125.65	19.34	59.07
52	E21_Da	NovelBoundary	0	1.65	14.66	3.39	1.08	9.82	8.66	4.08
53	E21a_E22a	KnownJunction	0	29.98	13.35	5.98	3.98	124.67	10.80	49.50
54	ER22a	ExonRegion	0	45.00	32.93	14.78	8.96	113.91	19.88	60.41
55	E22a_E23a	KnownJunction	0	49.92	36.44	13.02	12.30	107.84	15.95	50.37
56	ER23a	ExonRegion	0	46.48	32.33	12.46	14.12	109.25	14.07	45.43
57	E23_Ab	KnownBoundary	0	48.52	26.40	14.95	13.06	110.52	13.24	49.97
58	ER23b	ExonRegion	0	51.04	24.88	13.12	7.16	131.06	11.19	51.42
59	E23_Da	KnownBoundary	0	52.99	22.38	22.19	6.69	165.93	10.45	50.33
60	ER23c	ExonRegion	0	46.22	22.11	21.26	4.58	102.22	8.93	45.89
61	E23b_E24a	KnownJunction	0	45.18	26.14	13.84	8.45	65.26	6.03	47.34
62	ER24a	ExonRegion	0	21.27	27.42	10.44	5.29	67.35	7.76	27.03
63	E24a_E25a	KnownJunction	0	25.44	22.38	16.94	7.50	78.63	8.76	33.98
64	ER25a	ExonRegion	0	57.92	39.37	17.48	9.33	182.85	18.70	60.56