Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 HSD11B1 Gene 0 79.97 81.90 35.96 6.89 0.14 141.11 16.41 2 367028 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 261465 Transcript 0 0.00 0.00 0.00 0.00 1.01 0.00 0.00 4 367027 Transcript 0 28.83 30.76 16.53 3.92 0.00 45.90 11.12 5 IG28 Intergenic 0 6.10 3.16 1.00 1.07 0.08 0.31 25.73 6 IG28_SR1 SilentIntergenicRegion 0 6.06 3.19 1.15 1.17 0.14 0.38 27.00 7 IG28_AR1 ActiveIntergenicRegion 0 8.50 3.47 1.43 1.54 0.00 0.00 30.26 8 IG28_SR2 SilentIntergenicRegion 0 6.69 2.91 0.86 0.69 0.00 0.31 22.63 9 IG28_AR2 ActiveIntergenicRegion 0 2.80 3.44 0.00 1.19 0.00 0.00 22.64 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ab KnownBoundary 0 0.87 2.99 0.00 1.35 0.00 0.00 6.23 12 ER1b ExonRegion 0 0.67 1.11 0.00 1.11 0.13 0.00 2.39 13 E1_Da NovelBoundary 1 0.62 4.02 0.00 4.82 0.00 1.39 13.53 14 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 1.01 0.00 0.00 16 I1 Intron 1 1.79 1.25 0.41 0.71 0.03 0.10 22.61 17 I1_SR1 SilentIntronRegion 1 9.06 1.29 0.54 1.06 0.00 0.77 26.38 18 I1_AR1 ActiveIntronRegion 1 7.61 5.29 1.32 0.89 0.00 0.00 30.05 19 I1_SR2 SilentIntronRegion 1 0.94 0.98 0.34 0.68 0.04 0.06 21.98 20 I1_AR2 ActiveIntronRegion 1 0.11 1.19 0.58 0.00 0.00 0.00 8.34 21 E2_Aa NovelBoundary 1 0.65 1.63 0.00 0.00 0.00 0.00 22.73 22 ER2a ExonRegion 0 28.83 30.76 16.53 3.92 0.00 45.90 11.12 23 E2_Ab KnownBoundary 0 39.12 42.09 18.14 6.72 0.00 54.62 17.23 24 E2_Ac KnownBoundary 0 40.19 53.15 26.90 4.74 0.00 81.07 9.23 25 ER2b ExonRegion 0 56.97 66.49 34.79 6.29 0.04 100.64 18.43 26 ER2c ExonRegion 0 26.97 54.28 17.91 3.45 0.27 82.19 8.06 27 E2_Da NovelBoundary 1 0.72 0.00 1.19 0.00 0.00 4.61 17.90 28 E2a_E3a KnownJunction 1 28.66 85.01 22.69 2.95 0.00 147.93 1.73 29 I2 Intron 1 0.94 0.36 0.52 0.37 0.05 5.27 18.58 30 I2_SR1 SilentIntronRegion 1 0.95 0.37 0.52 0.38 0.05 5.31 18.70 31 E3_Aa NovelBoundary 0 17.57 0.00 13.58 1.65 1.18 5.76 21.38 32 ER3a ExonRegion 0 75.33 80.55 43.67 8.94 0.18 167.77 14.18 33 E3_Da NovelBoundary 1 2.29 0.00 0.00 0.00 0.00 4.56 18.09 34 E3a_E4a KnownJunction 1 56.65 87.33 35.68 9.70 1.18 170.07 2.98 35 I3 Intron 1 1.74 0.96 0.22 0.37 0.00 4.61 23.48 36 I3_SR1 SilentIntronRegion 1 1.75 0.97 0.22 0.37 0.00 4.62 23.53 37 E4_Aa NovelBoundary 1 0.00 1.44 0.83 0.00 0.00 3.19 16.87 38 ER4a ExonRegion 1 69.94 104.25 39.78 14.22 0.16 203.21 7.34 39 E4_Da NovelBoundary 1 0.60 1.63 0.65 0.00 0.00 3.97 20.92 40 E4a_E5a KnownJunction 1 122.77 151.27 55.69 17.45 0.00 284.94 3.58 41 I4 Intron 1 0.48 0.00 0.42 0.00 0.00 2.28 8.33 42 I4_SR1 SilentIntronRegion 1 0.47 0.00 0.45 0.00 0.00 2.42 8.68 43 E5_Aa NovelBoundary 1 0.85 1.13 0.00 0.00 0.00 5.36 24.59 44 ER5a ExonRegion 0 126.05 145.72 57.92 15.43 0.22 248.63 15.21 45 E5_Da NovelBoundary 1 3.84 0.00 0.55 0.00 0.00 1.42 16.19 46 E5a_E6a KnownJunction 1 134.22 145.02 52.11 15.93 0.00 224.58 2.44 47 E5a_E7a NovelJunction 1 2.90 1.47 0.85 0.00 0.00 17.10 0.00 48 I5 Intron 1 1.62 1.22 1.37 0.83 0.03 2.59 23.09 49 I5_SR1 SilentIntronRegion 1 2.00 3.05 1.77 1.01 0.04 3.21 27.35 50 I5_AR2 ActiveIntronRegion 1 2.29 0.30 3.12 1.02 0.00 2.90 24.43 51 I5_AR3 ActiveIntronRegion 1 1.24 0.14 0.15 0.00 0.00 2.06 10.87 52 I5_SR2 SilentIntronRegion 1 1.53 0.86 1.24 0.79 0.02 2.45 22.22 53 E6_Aa NovelBoundary 1 2.07 1.39 0.00 0.00 0.00 2.76 21.00 54 ER6a ExonRegion 0 143.75 157.52 59.16 12.94 0.29 228.37 22.06 55 E6_Da NovelBoundary 1 2.72 0.00 1.42 0.00 0.00 4.88 27.95 56 E6a_E7a KnownJunction 1 131.85 118.38 45.64 8.05 0.00 215.23 3.78 57 I6 Intron 1 1.00 0.40 0.41 0.21 0.00 1.22 23.49 58 I6_SR1 SilentIntronRegion 1 1.48 0.54 0.45 0.55 0.00 1.63 18.94 59 I6_AR2 ActiveIntronRegion 1 0.89 0.00 0.66 0.00 0.00 0.36 36.16 60 I6_SR2 SilentIntronRegion 1 0.70 0.74 0.21 0.00 0.00 1.87 22.63 61 E7_Aa NovelBoundary 1 2.00 0.00 2.36 0.00 0.00 2.63 23.02 62 ER7a ExonRegion 0 96.78 77.76 38.64 3.93 0.07 138.28 24.22 63 E7_Da KnownBoundary 1 4.09 1.42 1.48 0.00 0.00 3.94 13.46 64 ER7b ExonRegion 1 1.14 1.34 1.25 0.00 0.00 1.08 8.22 65 IG29 Intergenic 0 3.48 2.15 3.12 0.77 0.09 7.16 21.78 66 IG29_SR1 SilentIntergenicRegion 0 3.89 1.13 2.97 0.91 0.00 2.03 31.93 67 IG29_AR1 ActiveIntergenicRegion 0 6.02 3.64 3.39 0.00 0.00 1.23 37.44 68 IG29_SR2 SilentIntergenicRegion 0 2.87 1.72 2.46 0.61 0.12 5.93 20.72 69 IG29_AR2 ActiveIntergenicRegion 0 6.91 4.97 7.28 1.38 0.00 17.10 25.31 70 IG29_SR3 SilentIntergenicRegion 0 3.23 2.50 2.62 1.28 0.00 6.28 17.51