Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C1orf98	Gene	0	2.16	1.68	3.23	2.90	14.21	1.75	1.02
2	367356	Transcript	0	1.65	0.88	2.44	1.37	6.50	1.11	0.30
3	367355	Transcript	0	1.53	1.20	1.83	2.18	9.71	1.05	0.47
4	IG28	Intergenic	0	4.97	4.79	10.38	6.22	18.02	3.82	5.53
5	IG28_AR14	ActiveIntergenicRegion	0	59.02	53.38	103.41	63.56	208.96	41.35	67.71
6	IG28_SR9	SilentIntergenicRegion	0	1.49	0.57	1.81	0.05	12.15	0.54	1.23
7	IG28_SR7	SilentIntergenicRegion	0	1.15	0.28	5.57	0.99	11.75	1.62	1.98
8	IG28_AR11	ActiveIntergenicRegion	0	4.49	1.08	10.42	5.20	23.64	3.47	1.93
9	IG28_SR6	SilentIntergenicRegion	0	2.87	1.96	7.77	3.45	31.20	2.24	4.43
10	IG28_AR9	ActiveIntergenicRegion	0	0.85	0.00	5.35	3.74	13.20	1.23	3.91
11	IG28_AR8	ActiveIntergenicRegion	0	1.54	0.00	6.40	3.74	16.49	1.23	3.07
12	IG28_AR7	ActiveIntergenicRegion	0	2.04	0.00	6.98	2.93	23.40	1.23	4.01
13	IG28_AR6	ActiveIntergenicRegion	0	2.31	2.22	9.65	3.36	32.75	1.42	3.82
14	IG28_SR5	SilentIntergenicRegion	0	1.71	4.04	11.99	1.22	42.81	0.00	4.57
15	IG28_AR5	ActiveIntergenicRegion	0	1.94	3.81	12.48	2.44	36.90	0.39	5.60
16	IG28_AR4	ActiveIntergenicRegion	0	1.15	0.89	5.99	1.40	11.07	1.95	1.83
17	ER1a	ExonRegion	0	3.28	2.00	6.96	3.14	20.90	1.65	1.20
18	E1a_E3a	KnownJunction	0	3.34	1.52	2.79	2.33	5.09	2.79	0.00
19	ER2a	ExonRegion	0	0.40	0.20	2.10	1.30	1.95	0.00	0.35
20	E2a_E3a	KnownJunction	0	0.00	1.44	0.00	0.00	0.00	0.00	0.00
21	ER3a	ExonRegion	0	2.64	2.78	3.25	4.29	6.98	2.37	0.00
22	E3a_E4a	KnownJunction	0	0.88	0.00	1.77	2.38	1.04	0.00	0.00
23	E3a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER4a	ExonRegion	0	5.15	1.05	3.70	3.68	49.62	2.24	0.44
25	E4_Da	NovelBoundary	0	6.43	4.20	11.34	6.07	13.65	3.32	1.66
26	E4a_E5a	KnownJunction	0	1.54	1.55	1.16	2.84	5.33	1.07	0.00
27	ER5a	ExonRegion	0	2.78	4.28	4.40	4.78	11.53	2.75	1.73
28	E5_Da	NovelBoundary	0	0.00	0.00	3.22	4.82	9.73	0.00	0.89
29	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.95	0.00	0.00
30	I5_AR1	ActiveIntronRegion	0	2.34	1.42	3.16	1.31	9.00	2.03	1.09
31	I5_SR2	SilentIntronRegion	0	1.30	1.47	3.91	1.36	9.00	1.73	0.32
32	ER6a	ExonRegion	0	1.55	2.77	1.37	3.04	9.40	1.47	0.43
33	E6_Da	KnownBoundary	0	5.46	2.97	2.04	1.06	9.57	1.15	1.50
34	E6a_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER6b	ExonRegion	0	1.47	1.08	1.49	2.47	7.29	2.30	1.27
36	E6_Ab	KnownBoundary	0	1.59	0.00	0.88	4.47	4.93	0.00	0.00
37	ER6c	ExonRegion	0	1.18	0.43	2.10	1.85	17.15	0.44	0.93