Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RER1	Gene	0	89.08	98.67	118.42	101.19	124.96	85.95	184.67
2	306256	Transcript	0	18.33	13.77	28.21	18.97	30.26	11.16	32.52
3	378518	Transcript	0	0	0	0	0	0	0	0
4	378513	Transcript	0	0	0	0	0	0	0	0
5	378512	Transcript	0	6.60	8.83	8.30	14.76	5.75	5.72	9.59
6	ER1a	ExonRegion	0	2.83	2.07	1.38	2.03	2.92	0.00	5.46
7	E1_Ab	KnownBoundary	0	1.60	1.63	0.85	3.25	2.31	0.00	4.23
8	E1_Ac	KnownBoundary	1	27.12	8.25	7.26	5.50	34.03	0.00	31.36
9	ER1b	ExonRegion	0	19.85	8.10	10.89	8.52	35.03	3.17	28.50
10	ER1c	ExonRegion	0	66.99	33.29	38.68	42.87	101.70	35.36	89.96
11	E1_Ad	KnownBoundary	1	107.67	65.26	81.68	89.29	122.06	85.12	229.93
12	ER1d	ExonRegion	0	52.40	43.38	31.74	52.23	34.00	46.14	75.62
13	E1a_E2a	KnownJunction	0	25.07	49.05	22.37	28.31	19.23	38.51	60.16
14	Ix_SR1	SilentIntronRegion	0	24.15	31.51	47.11	41.32	13.04	32.16	34.87
15	Ix_AR2	ActiveIntronRegion	0	20.46	21.39	34.66	30.62	15.93	24.65	35.49
16	E2_Aa	NovelBoundary	1	18.34	11.48	13.13	8.29	20.24	6.81	55.65
17	ER2a	ExonRegion	0	191.86	165.05	211.27	188.32	247.17	180.14	327.40
18	E2a_E3a	KnownJunction	0	419.85	258.33	441.10	317.40	427.22	281.00	625.72
19	ER3a	ExonRegion	0	323.86	370.00	400.76	341.15	359.63	345.65	721.19
20	E3a_E4a	KnownJunction	0	194.35	376.92	266.18	296.81	269.74	342.10	459.58
21	E3a_E5a	KnownJunction	1	3.24	30.37	2.43	6.07	4.33	8.68	21.02
22	ER4a	ExonRegion	0	310.49	367.65	379.59	291.90	326.33	323.68	621.05
23	E4a_E5a	KnownJunction	0	392.43	465.95	510.02	352.51	464.42	400.58	933.48
24	ER5a	ExonRegion	0	270.32	367.89	340.24	293.08	412.31	288.70	668.40
25	E5a_E6a	KnownJunction	0	5.76	5.70	6.01	12.71	1.80	3.08	5.06
26	E5a_E6b	KnownJunction	0	219.24	240.57	234.16	266.60	317.05	239.91	457.27
27	ER6a	ExonRegion	0	7.44	11.95	10.59	16.82	9.70	8.36	14.12
28	E6_Ab	KnownBoundary	0	10.73	8.25	7.63	16.17	6.92	5.55	18.70
29	ER6b	ExonRegion	0	234.45	333.94	279.38	299.18	389.00	262.58	630.62
30	E6_Da	NovelBoundary	0	209.73	226.99	207.32	222.50	218.91	185.43	464.91
31	E6b_E7a	KnownJunction	0	272.40	313.86	288.51	312.09	287.49	255.88	601.79
32	ER6c	ExonRegion	0	281.43	322.51	298.57	317.98	301.79	271.81	647.57
33	ER7a	ExonRegion	0	118.02	143.90	164.18	154.45	165.51	124.32	243.88
34	E7_Da	KnownBoundary	0	13.49	0.00	30.82	0.00	15.01	3.43	6.81
35	E7_Db	KnownBoundary	1	13.25	4.26	45.09	2.76	25.06	6.99	16.18
36	ER7b	ExonRegion	1	35.73	5.47	101.27	3.74	59.93	12.26	33.39
37	ER7c	ExonRegion	0	33.84	25.46	55.04	35.91	57.60	22.33	59.58