Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RERE	Gene	0	117.34	90.18	99.78	75.72	149.66	153.87	48.54
2	400908	Transcript	1	48.63	20.83	36.67	36.36	26.49	15.70	18.06
3	337907	Transcript	0	8.59	1.14	5.18	6.45	8.88	2.27	1.78
4	377464	Transcript	1	7.88	7.17	8.63	1.75	11.16	13.18	4.70
5	400907	Transcript	1	4.62	9.11	3.51	2.35	2.70	25.09	2.85
6	ER1a	ExonRegion	0	11.84	15.51	9.13	24.64	9.44	18.24	6.17
7	E1a_E2a	KnownJunction	0	6.49	0.00	0.76	3.36	3.23	1.39	0.89
8	E1a_E3a	KnownJunction	0	48.63	20.83	36.67	36.36	26.49	15.70	18.06
9	ER2a	ExonRegion	0	12.52	1.79	10.97	8.66	19.09	3.96	3.00
10	E2a_E3a	KnownJunction	0	6.76	1.63	3.79	7.34	4.31	1.45	1.43
11	ER3a	ExonRegion	0	118.77	81.66	69.32	104.16	142.88	57.51	40.69
12	E3a_E4a	KnownJunction	0	145.59	107.40	88.94	125.05	240.97	71.56	61.55
13	ER4a	ExonRegion	0	135.02	83.07	77.03	86.11	188.67	46.95	44.40
14	E4a_E5a	KnownJunction	0	105.75	59.53	60.08	37.63	93.36	37.41	39.80
15	E4a_E6a	NovelJunction	0	30.36	18.55	28.45	29.42	86.13	18.89	13.41
16	ER5a	ExonRegion	0	121.17	58.65	56.51	42.97	111.45	31.11	34.25
17	E5a_E6a	KnownJunction	1	125.24	46.24	55.57	30.99	117.52	16.16	29.32
18	ER6a	ExonRegion	1	130.53	64.23	84.98	59.31	164.12	25.19	40.93
19	E6a_E7a	KnownJunction	1	107.68	68.46	87.14	47.60	197.26	26.80	39.73
20	ER7a	ExonRegion	1	127.73	77.22	91.33	66.40	177.75	33.92	38.44
21	E7a_E8a	KnownJunction	1	156.57	89.30	119.42	64.31	180.50	25.49	46.52
22	ER8a	ExonRegion	1	127.55	81.43	106.52	52.91	166.85	31.99	41.66
23	E8a_E10a	KnownJunction	1	96.87	63.08	76.36	52.91	150.97	25.49	37.81
24	ER9a	ExonRegion	0	13.23	10.52	11.85	1.45	6.09	11.89	6.91
25	E9a_E10a	KnownJunction	1	1.95	4.31	5.92	1.30	1.06	14.77	5.16
26	ER10a	ExonRegion	0	113.24	82.71	97.00	77.01	136.44	53.12	59.63
27	E10a_E11a	KnownJunction	0	99.26	69.49	92.07	81.06	126.79	53.87	60.46
28	ER11a	ExonRegion	0	120.53	89.62	104.95	82.30	162.40	44.51	56.95
29	E11a_E12a	KnownJunction	0	105.11	88.69	91.90	55.08	138.50	64.96	62.08
30	ER12a	ExonRegion	0	104.90	99.22	93.90	80.52	167.97	62.37	69.62
31	E12a_E13a	KnownJunction	0	129.31	97.28	112.48	81.27	210.68	56.23	66.15
32	ER13a	ExonRegion	0	123.95	105.56	88.25	76.85	180.71	52.67	62.23
33	E13a_E15a	KnownJunction	0	130.32	93.71	90.53	72.20	149.47	59.25	65.09
34	ER14a	ExonRegion	0	1.22	7.29	0.66	2.32	1.13	15.01	0.86
35	E14a_E15a	KnownJunction	1	8.03	10.93	6.37	2.38	4.26	35.16	4.83
36	ER15a	ExonRegion	0	142.89	148.23	115.97	105.76	146.29	190.39	65.45
37	E15a_E16a	KnownJunction	0	157.49	165.30	136.91	107.74	192.19	276.49	56.05
38	I15_AR9	ActiveIntronRegion	0	31.18	5.79	21.12	9.95	19.55	8.61	4.29
39	ER16a	ExonRegion	0	183.74	185.54	157.54	115.93	187.82	332.95	69.38
40	E16a_E17a	KnownJunction	0	219.37	211.38	178.11	115.49	115.29	364.02	57.20
41	ER17a	ExonRegion	0	112.39	198.82	114.17	104.53	111.45	323.24	52.30
42	E17a_E18a	KnownJunction	0	111.39	189.65	119.30	105.52	133.29	291.53	66.87
43	ER18a	ExonRegion	0	128.16	152.22	131.25	106.15	146.28	281.39	62.64
44	E18a_E19a	KnownJunction	0	101.96	136.27	115.57	90.59	122.69	255.54	81.02
45	ER19a	ExonRegion	0	112.85	156.23	118.82	99.96	164.73	269.90	67.80
46	E19a_E20a	KnownJunction	0	168.59	235.63	176.35	129.28	363.73	338.94	101.05
47	ER20a	ExonRegion	0	288.25	239.80	238.74	163.16	290.89	435.37	117.49
48	E20a_E21a	KnownJunction	0	331.51	229.69	249.81	223.85	218.45	504.99	115.77
49	ER21a	ExonRegion	0	65.39	80.58	59.61	66.48	70.48	141.40	32.29
50	E21a_E22a	KnownJunction	0	31.14	62.60	33.15	39.55	41.33	85.28	26.61
51	E21a_E23a	NovelJunction	0	4.87	8.85	3.84	6.61	6.71	9.25	3.94
52	ER22a	ExonRegion	0	78.50	84.62	70.00	73.11	154.50	136.51	49.36
53	E22a_E23a	KnownJunction	0	167.03	109.79	128.01	107.77	187.03	198.77	101.85
54	ER23a	ExonRegion	0	121.58	101.40	91.10	90.14	145.24	181.07	63.76
55	E23a_E24a	KnownJunction	0	92.31	103.17	60.04	90.46	93.69	228.68	44.30
56	ER24a	ExonRegion	0	128.22	87.43	64.99	83.07	157.11	181.06	49.14
57	E24a_E25a	KnownJunction	0	165.63	70.28	73.79	68.84	211.88	149.41	49.41
58	E24a_E26a	NovelJunction	0	9.03	5.41	3.56	5.50	4.38	15.12	1.61
59	ER25a	ExonRegion	0	123.17	58.93	73.89	51.10	137.54	103.68	28.18
60	E25a_E26a	KnownJunction	1	400.56	68.44	273.41	53.07	168.47	136.73	54.63
61	ER26a	ExonRegion	0	168.83	101.52	156.48	86.09	231.55	213.92	63.89
62	ER26b	ExonRegion	0	8.45	6.68	8.13	2.49	26.32	12.87	2.02