Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZNF137	Gene	0	16.00	7.30	13.63	6.06	18.82	1.90	16.43
2	333303	Transcript	0	10.01	2.76	5.91	1.56	10.79	0.31	3.88
3	406609	Transcript	0	8.23	3.84	6.81	4.58	9.31	0.46	8.47
4	390651	Transcript	0	10.05	4.95	7.37	3.64	12.10	1.04	9.14
5	ER1a	ExonRegion	0	34.05	14.00	31.87	14.34	28.78	3.59	33.19
6	E1_Da	KnownBoundary	0	26.87	10.64	27.35	11.62	30.48	1.66	25.88
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	0	16.47	7.69	13.62	9.16	18.62	0.91	16.94
9	E1_Db	NovelBoundary	0	23.75	6.52	9.56	1.68	24.60	0.00	15.69
10	E1b_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E2_Aa	NovelBoundary	0	22.98	5.20	13.36	1.11	19.20	0.00	12.58
12	ER2a	ExonRegion	0	2.10	0.00	0.59	0.00	10.53	0.00	0.00
13	E2_Da	NovelBoundary	0	630.13	228.22	475.20	145.99	615.63	60.25	643.54
14	E2a_E3a	KnownJunction	0	0.82	4.18	1.24	0.00	4.96	0.00	0.79
15	I2	Intron	0	6.50	2.25	2.91	0.00	20.77	1.14	4.80
16	I2_SR1	SilentIntronRegion	0	6.60	2.29	2.97	0.00	21.15	1.16	4.86
17	E3_Aa	NovelBoundary	0	59.63	6.07	31.80	8.67	59.91	1.23	33.82
18	ER3a	ExonRegion	1	37.13	6.85	21.83	6.26	27.67	1.24	14.74
19	E3_Ab	KnownBoundary	0	45.66	10.32	22.63	8.18	42.90	1.45	25.27
20	ER3b	ExonRegion	1	36.33	8.01	13.37	6.47	36.93	1.23	21.90
21	E3_Ac	NovelBoundary	0	66.58	18.47	47.42	49.55	55.42	13.53	51.11
22	E3a_E3d	KnownJunction	1	39.99	4.73	17.73	10.86	24.53	0.00	18.87
23	E3_Ad	NovelBoundary	0	0.00	0.00	0.00	0.00	10.40	0.00	0.00
24	ER3c	ExonRegion	1	24.97	5.67	9.93	6.65	28.61	0.20	13.94
25	ER3d	ExonRegion	0	16.14	4.86	7.23	2.91	24.03	0.00	9.44
26	ER3e	ExonRegion	0	36.89	12.88	22.81	9.83	37.52	0.47	22.59
27	E3_Db	KnownBoundary	0	243.84	81.60	159.17	69.33	264.67	14.23	177.68
28	E3b_E3e	KnownJunction	0	395.84	131.15	271.70	84.31	133.31	34.68	214.51
29	ER3f	ExonRegion	0	28.38	17.55	18.95	12.22	26.87	1.73	23.25
30	E3_Ae	KnownBoundary	0	25.84	7.54	17.27	5.04	28.79	1.34	26.71
31	ER3g	ExonRegion	0	15.61	9.44	15.57	6.29	27.92	1.77	22.05
32	E3_Dc	KnownBoundary	1	31.06	29.24	29.27	6.85	86.43	2.33	53.44
33	ER3h	ExonRegion	0	9.60	3.77	10.18	3.09	12.43	2.73	11.77
34	E3_Dd	NovelBoundary	0	113.89	59.48	119.55	50.39	159.69	36.07	78.88
35	E3d_E4a	KnownJunction	0	0.00	0.00	0.72	0.00	0.00	0.00	0.59
36	I3	Intron	1	4.91	4.00	5.70	5.74	5.58	1.08	11.79
37	I3_SR1	SilentIntronRegion	1	4.78	4.34	5.29	6.47	6.15	1.21	13.67
38	E4_Aa	NovelBoundary	0	1910.25	1653.21	1554.77	1519.35	905.19	1661.64	842.73
39	ER4a	ExonRegion	0	7.17	3.09	6.96	3.98	8.82	0.30	6.98
40	E4_Da	NovelBoundary	0	123.09	58.80	98.59	70.30	63.67	64.83	87.54
41	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	E5_Aa	NovelBoundary	0	1753.83	1010.66	1190.58	868.70	839.10	684.36	733.48
43	ER5a	ExonRegion	0	9.08	5.41	7.58	3.28	12.53	2.49	11.96
44	IG26	Intergenic	0	3.42	5.99	3.97	7.35	2.52	1.56	9.78
45	IG26_SR2	SilentIntergenicRegion	0	4.39	6.89	5.00	8.74	3.15	1.92	12.89