Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZNF254	Gene	0	38.67	43.66	53.50	13.06	82.44	46.17	24.63
2	392281	Transcript	0	78.79	49.02	88.52	14.39	23.68	66.25	45.99
3	357002	Transcript	0	40.78	51.64	58.41	15.99	94.92	51.84	28.20
4	339642	Transcript	0	0.00	0.00	0.00	0.00	1.55	0.00	0.00
5	IG46_AR1	ActiveIntergenicRegion	0	26.06	23.44	31.45	15.59	47.34	29.86	8.96
6	IG46_AR3	ActiveIntergenicRegion	0	22.39	22.10	25.61	10.43	21.71	22.42	6.68
7	IG46_SR4	SilentIntergenicRegion	0	7.81	17.82	11.18	4.99	22.68	14.71	5.40
8	IG46_AR4	ActiveIntergenicRegion	0	7.68	16.11	8.81	4.00	20.46	12.32	5.11
9	IG46_AR5	ActiveIntergenicRegion	0	6.66	14.38	7.45	1.25	16.06	12.26	4.50
10	IG46_SR5	SilentIntergenicRegion	0	16.43	8.91	9.92	4.12	15.37	5.73	5.05
11	IG46_AR6	ActiveIntergenicRegion	0	17.14	11.75	15.50	4.19	13.76	8.01	4.96
12	IG46_SR6	SilentIntergenicRegion	0	6.16	8.08	6.56	3.15	7.34	7.65	2.35
13	IG46_AR8	ActiveIntergenicRegion	0	28.94	15.17	29.83	8.11	27.86	24.97	8.49
14	IG46_SR8	SilentIntergenicRegion	0	5.79	6.56	8.22	1.94	8.95	1.43	3.92
15	IG46_AR11	ActiveIntergenicRegion	0	0.69	0.00	0.61	0.00	9.15	1.23	0.00
16	IG46_SR11	SilentIntergenicRegion	0	15.12	7.50	16.44	4.15	36.95	8.18	8.65
17	IG46_SR13	SilentIntergenicRegion	0	12.58	5.73	23.51	3.10	33.70	3.04	9.02
18	IG46_SR14	SilentIntergenicRegion	0	23.44	5.88	23.85	4.18	34.05	5.91	7.46
19	IG46_AR16	ActiveIntergenicRegion	0	10.37	3.84	14.49	1.71	33.86	5.56	3.99
20	IG46_SR17	SilentIntergenicRegion	0	8.94	2.62	11.29	1.94	10.46	5.28	3.25
21	IG46_AR18	ActiveIntergenicRegion	0	23.45	6.95	29.05	8.21	15.59	15.99	5.25
22	ER1a	ExonRegion	0	4.61	0.79	0.98	0.00	7.33	1.23	2.66
23	ER1b	ExonRegion	0	26.36	30.63	15.94	8.49	31.54	15.84	13.56
24	E1_Da	NovelBoundary	0	8.63	10.59	10.73	12.41	4.06	5.33	4.43
25	E1a_E2a	KnownJunction	0	4.72	7.51	0.89	3.22	2.05	4.31	2.19
26	E1a_E3a	NovelJunction	0	0.00	13.08	0.85	1.30	3.07	9.06	1.66
27	I1_SR1	SilentIntronRegion	1	4.68	1.33	3.71	2.63	0.88	9.33	1.58
28	ER2a	ExonRegion	0	39.17	40.71	46.34	10.58	71.06	24.94	20.48
29	E2a_E3a	KnownJunction	1	43.78	43.98	51.58	2.93	88.66	25.73	19.26
30	ER3a	ExonRegion	1	34.28	58.06	56.29	5.59	101.13	47.32	20.86
31	E3_Da	NovelBoundary	1	33.15	14.06	27.79	3.98	13.99	10.61	2.88
32	E3a_E5a	KnownJunction	1	18.16	60.61	39.82	5.80	93.23	42.58	21.05
33	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	1.55	0.00	0.00
34	ER5a	ExonRegion	0	48.35	59.28	81.16	17.80	90.58	66.32	32.87
35	E5_Da	KnownBoundary	0	139.78	204.81	241.25	88.78	382.79	143.67	194.82
36	E5a_E5b	KnownJunction	0	78.79	49.02	88.52	14.39	23.68	66.25	45.99
37	ER5b	ExonRegion	0	57.01	83.79	86.00	25.95	133.34	76.06	41.93
38	E5_Ab	KnownBoundary	0	258.24	156.08	234.55	42.32	206.76	114.89	60.09
39	ER5c	ExonRegion	0	71.86	50.49	73.54	16.09	112.94	64.59	31.89
40	E5_Db	KnownBoundary	0	61.44	44.21	80.57	21.29	94.56	57.11	34.28
41	ER5d	ExonRegion	0	24.55	19.50	30.81	6.04	56.50	27.62	14.48
42	IG47_AR19	ActiveIntergenicRegion	0	4.54	4.64	8.60	24.87	6.21	0.00	4.22
43	IG47_SR13	SilentIntergenicRegion	0	3.73	4.07	7.19	14.83	4.00	1.03	4.33
44	IG47_AR20	ActiveIntergenicRegion	0	2.36	4.77	5.35	9.22	3.56	1.47	3.74
45	IG47_AR23	ActiveIntergenicRegion	0	4.17	3.93	9.31	3.22	5.18	0.00	3.30
46	IG47_AR26	ActiveIntergenicRegion	0	5.82	10.85	11.99	20.11	9.33	4.65	26.17
47	IG47_AR31	ActiveIntergenicRegion	0	10.10	6.09	27.31	6.61	21.86	4.28	21.69
48	IG47_AR33	ActiveIntergenicRegion	0	7.88	1.56	12.89	2.17	17.92	0.25	6.84
49	IG47_SR23	SilentIntergenicRegion	0	4.45	0.00	8.74	3.31	21.93	0.48	5.77
50	IG47_AR34	ActiveIntergenicRegion	0	5.56	1.17	8.52	0.75	13.56	1.02	6.94
51	IG47_AR36	ActiveIntergenicRegion	0	2.63	0.85	7.44	2.45	10.32	0.00	5.40
52	IG47_AR37	ActiveIntergenicRegion	0	5.29	4.90	14.96	8.50	16.69	2.95	18.17
53	IG47_AR38	ActiveIntergenicRegion	0	3.98	1.32	6.15	3.26	8.98	1.12	8.37
54	IG47_AR74	ActiveIntergenicRegion	0	0.00	0.00	0.05	0.00	14.35	0.00	0.05
55	IG47_SR60	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	10.36	0.00	0.08
56	IG47_AR78	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	8.38	0.00	0.00
57	IG47_AR83	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	9.88	0.00	0.27