Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	YJEFN3	Gene	0	6.56	9.65	9.07	28.35	16.41	35.17	5.82
2	397179	Transcript	0	3.37	7.76	3.93	21.74	6.47	23.99	3.53
3	334631	Transcript	0	7.46	9.25	2.17	23.38	6.59	26.24	6.58
4	IG45	Intergenic	0	3.53	4.73	3.86	5.60	10.38	4.92	2.46
5	IG45_AR1	ActiveIntergenicRegion	0	3.35	6.99	5.81	7.88	11.90	4.42	2.10
6	IG45_SR1	SilentIntergenicRegion	0	5.36	8.23	11.69	12.58	20.85	10.54	5.09
7	IG45_AR2	ActiveIntergenicRegion	0	5.12	4.99	10.69	11.64	21.96	13.49	4.35
8	IG45_SR2	SilentIntergenicRegion	0	4.99	3.99	6.91	10.94	13.01	9.98	3.98
9	IG45_AR3	ActiveIntergenicRegion	0	6.92	4.86	5.42	9.98	7.96	5.31	3.37
10	IG45_AR4	ActiveIntergenicRegion	0	8.07	5.67	5.42	9.98	13.57	3.27	3.94
11	IG45_SR3	SilentIntergenicRegion	0	9.20	6.98	3.58	7.22	18.31	7.30	3.64
12	IG45_AR5	ActiveIntergenicRegion	0	8.33	5.51	2.03	6.23	18.94	8.30	1.66
13	IG45_SR4	SilentIntergenicRegion	0	3.99	2.85	1.72	3.42	8.08	5.54	0.44
14	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER1b	ExonRegion	0	0.48	0.00	0.00	0.05	3.74	0.14	0.03
16	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	2.24	0.00	0.00
17	I1	Intron	0	4.90	6.19	7.32	6.10	10.93	6.75	5.34
18	I1_SR1	SilentIntronRegion	0	5.03	6.87	8.03	6.69	12.18	6.97	6.01
19	E2_Aa	NovelBoundary	0	5.16	5.33	6.35	5.66	14.73	7.66	11.88
20	ER2a	ExonRegion	0	6.76	5.90	11.75	15.97	20.26	27.78	3.69
21	E2_Da	NovelBoundary	0	6.49	10.77	15.22	15.31	11.09	11.47	14.02
22	E2a_E3a	KnownJunction	0	0.70	1.52	1.49	4.42	4.36	8.71	0.00
23	I2	Intron	0	10.26	8.49	9.96	11.15	17.48	8.55	9.77
24	I2_SR1	SilentIntronRegion	0	10.38	8.84	10.20	11.56	17.63	9.01	9.87
25	I2_AR1	ActiveIntronRegion	0	8.50	2.72	6.21	4.46	15.44	0.79	8.37
26	E3_Aa	NovelBoundary	0	10.58	7.28	5.68	2.47	7.38	8.76	3.80
27	ER3a	ExonRegion	0	2.44	7.57	8.51	10.47	19.94	21.62	3.73
28	E3_Da	NovelBoundary	0	12.87	17.31	16.97	11.84	25.57	4.40	18.09
29	E3a_E4a	KnownJunction	0	0.00	1.63	0.00	12.92	9.66	14.31	0.00
30	I3	Intron	0	19.23	10.31	17.64	21.04	30.79	17.37	12.69
31	I3_AR1	ActiveIntronRegion	0	15.97	10.98	11.50	11.06	26.41	6.17	10.95
32	I3_SR1	SilentIntronRegion	0	15.75	10.74	10.46	10.79	29.32	4.33	14.49
33	I3_AR2	ActiveIntronRegion	0	20.37	10.15	19.89	24.41	31.72	21.43	12.60
34	E4_Aa	NovelBoundary	0	14.27	7.78	14.54	24.41	36.15	18.73	10.88
35	ER4a	ExonRegion	0	12.00	14.26	11.87	42.96	27.27	55.18	7.88
36	E4a_E5a	KnownJunction	0	16.11	14.74	16.57	57.08	34.07	62.10	14.86
37	ER5a	ExonRegion	0	14.76	21.30	19.77	60.88	26.56	69.62	14.69
38	E5a_E6a	KnownJunction	0	8.51	16.18	19.27	43.64	26.90	64.94	4.21
39	ER6a	ExonRegion	0	8.79	15.50	14.80	40.43	21.38	58.55	6.34
40	E6_Da	KnownBoundary	0	4.34	8.17	8.12	16.04	11.39	24.95	0.75
41	E6a_E6b	KnownJunction	0	7.46	9.25	2.17	23.38	6.59	26.24	6.58
42	E6_Ab	KnownBoundary	0	4.22	6.33	0.66	14.55	3.23	10.72	4.72
43	ER6b	ExonRegion	0	7.68	16.20	9.03	40.32	13.23	48.22	5.85
44	ER6c	ExonRegion	0	8.42	12.57	8.57	38.91	17.12	41.09	6.32
45	E6b_E7a	KnownJunction	0	5.07	4.99	11.31	27.09	11.25	31.70	4.82
46	I6	Intron	0	5.13	4.24	3.86	8.53	10.24	5.57	9.06
47	I6_AR1	ActiveIntronRegion	0	5.73	4.66	3.79	11.26	9.61	7.09	11.28
48	I6_SR1	SilentIntronRegion	0	5.03	4.62	5.04	4.31	14.95	3.48	7.46
49	E7_Aa	NovelBoundary	0	3.66	4.31	2.73	6.15	1.98	11.58	2.71
50	ER7a	ExonRegion	1	6.02	3.57	9.52	25.27	9.17	36.28	4.35
51	E7_Da	KnownBoundary	0	6.66	5.02	7.76	32.48	11.69	38.83	8.04
52	ER7b	ExonRegion	0	2.43	7.09	2.76	24.90	6.17	23.74	4.75