Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PGPEP1	Gene	0	20.95	13.22	7.69	2.93	54.39	4.18	19.45
2	252813	Transcript	0	0.00	0.07	0.00	0.00	0.00	0.00	0.00
3	269919	Transcript	0	21.39	11.52	8.13	2.57	54.13	4.08	17.40
4	ER1a	ExonRegion	0	0.00	0.20	0.00	0.00	0.00	0.00	0.00
5	ER1b	ExonRegion	0	6.85	12.08	2.32	2.22	42.53	1.10	14.69
6	E1a_E2a	KnownJunction	0	12.17	22.15	4.40	4.44	25.98	2.92	27.85
7	ER2a	ExonRegion	0	7.97	18.34	4.59	2.66	17.24	1.36	19.93
8	E2a_E3a	KnownJunction	1	5.92	20.47	2.63	1.19	10.42	2.49	22.26
9	ER3a	ExonRegion	0	27.49	29.68	6.47	5.48	64.70	5.30	39.87
10	E3a_E4a	KnownJunction	0	24.30	19.86	5.20	3.47	106.99	6.11	46.48
11	E3a_E5a	NovelJunction	0	4.46	4.36	1.47	1.38	29.35	0.00	5.16
12	ER4a	ExonRegion	0	23.35	27.71	6.25	4.44	73.88	8.16	41.48
13	E4a_E5a	KnownJunction	0	31.64	14.69	7.73	7.07	64.89	5.71	34.22
14	ER5a	ExonRegion	0	21.14	20.60	6.81	5.29	59.08	4.65	28.11
15	E5_Da	KnownBoundary	0	2.44	3.52	2.00	0.00	3.23	0.00	3.34
16	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER5b	ExonRegion	0	21.39	11.52	8.13	2.57	54.13	4.08	17.40
18	Ix	Intron	0	15.53	17.57	16.32	8.39	21.21	14.69	4.26
19	Ix_AR1	ActiveIntronRegion	0	15.62	17.64	16.38	8.42	21.32	14.78	4.29
20	I5	Intron	0	9.53	6.11	5.81	6.03	0.21	7.93	2.68
21	I5_SR1	SilentIntronRegion	0	10.02	6.99	6.64	4.79	0.17	7.87	2.49
22	I5_AR2	ActiveIntronRegion	0	9.86	7.50	6.71	7.94	0.11	12.04	2.98
23	I5_SR2	SilentIntronRegion	0	13.96	9.15	10.50	9.42	0.00	16.25	5.20
24	I5_AR3	ActiveIntronRegion	0	10.65	6.07	8.90	9.98	0.00	9.81	4.72
25	I5_AR4	ActiveIntronRegion	0	8.95	3.04	8.03	11.22	0.00	8.93	6.65
26	I5_AR5	ActiveIntronRegion	0	9.46	2.62	9.22	11.61	0.00	5.75	7.37
27	I5_AR6	ActiveIntronRegion	0	11.25	8.77	8.73	10.29	0.00	6.88	6.78
28	I5_AR7	ActiveIntronRegion	0	14.01	7.09	5.96	9.87	0.39	8.86	3.60
29	Ix	Intron	0	15.91	28.79	10.40	17.36	1.14	8.89	2.08
30	Ix_AR3	ActiveIntronRegion	0	17.10	38.65	14.52	36.19	1.44	14.78	2.04
31	Ix_AR4	ActiveIntronRegion	0	18.10	35.97	11.56	22.96	1.53	13.01	2.91
32	Ix_AR5	ActiveIntronRegion	0	18.20	30.41	7.48	10.64	0.81	4.12	1.30
33	Ix_SR3	SilentIntronRegion	0	20.90	29.46	10.94	16.28	0.99	8.17	1.30
34	Ix_AR6	ActiveIntronRegion	0	21.55	36.91	13.17	23.03	1.46	12.57	3.33
35	Ix_SR3	SilentIntronRegion	0	17.45	3.44	10.70	3.06	1.65	0.51	0.74
36	Ix	Intron	0	16.40	8.35	12.87	6.17	0.45	3.10	1.94
37	Ix_AR1	ActiveIntronRegion	0	19.26	14.78	22.04	9.84	0.70	13.17	5.82
38	Ix_AR3	ActiveIntronRegion	0	24.14	15.53	20.67	16.63	0.44	7.11	5.00
39	Ix_AR4	ActiveIntronRegion	0	19.17	12.82	15.10	5.79	0.45	5.53	3.42
40	Ix_SR4	SilentIntronRegion	0	16.00	8.60	12.99	6.65	0.42	3.03	2.08
41	Ix_SR5	SilentIntronRegion	0	18.33	7.58	14.17	6.07	0.50	2.67	2.01
42	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00