Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CRTC1 Gene 0 7.19 5.27 10.44 7.83 13.82 19.53 17.54 2 262813 Transcript 0 0.43 0.00 0.00 0.00 1.13 0.63 1.91 3 338797 Transcript 0 0.43 1.21 4.89 2.82 0.38 7.02 1.48 4 321949 Transcript 0 0 0 0 0 0 0 0 5 IG24_AR1 ActiveIntergenicRegion 0 4.94 8.52 5.94 14.37 8.10 63.18 5.48 6 IG24_SR1 SilentIntergenicRegion 0 5.35 12.46 7.65 21.62 10.69 100.37 5.71 7 IG24_AR2 ActiveIntergenicRegion 0 2.67 4.75 3.15 12.27 5.19 61.51 3.87 8 ER1a ExonRegion 0 8.44 5.26 14.42 6.47 15.22 23.65 17.79 9 E1a_E2a KnownJunction 0 1.79 7.49 7.10 7.18 6.59 27.63 12.12 10 ER2a ExonRegion 0 17.92 12.75 24.29 9.13 28.91 31.75 33.16 11 E2a_E3a KnownJunction 0 0.00 1.23 7.20 2.87 0.97 8.15 1.53 12 E2a_E4a KnownJunction 0 19.23 8.54 24.72 6.72 61.55 22.51 43.44 13 E2a_E6a NovelJunction 0 0.68 0.00 1.45 2.93 2.12 10.88 0.00 14 ER3a ExonRegion 0 0.45 1.01 4.33 2.60 0.19 7.38 1.60 15 E3a_E4a KnownJunction 0 0.85 1.39 3.15 2.98 0.00 5.52 1.30 16 ER4a ExonRegion 0 6.51 11.20 10.93 8.20 17.34 34.36 19.90 17 E4a_E5a KnownJunction 0 8.55 9.09 16.20 16.20 18.93 49.02 29.32 18 ER5a ExonRegion 0 11.89 16.28 29.02 20.17 39.09 57.33 48.80 19 E5a_E6a KnownJunction 0 16.24 24.09 40.97 20.81 68.58 65.79 57.24 20 ER6a ExonRegion 0 17.20 19.45 46.16 24.37 68.76 96.67 70.63 21 E6a_E7a KnownJunction 0 24.47 22.36 61.96 27.06 66.07 125.61 107.10 22 E7_Aa NovelBoundary 0 3.59 1.37 4.81 0.00 0.92 18.41 1.28 23 ER7a ExonRegion 0 25.87 22.11 55.89 33.07 52.26 140.56 96.80 24 E7a_E8a KnownJunction 0 20.91 22.54 43.37 21.54 36.93 86.54 62.59 25 ER8a ExonRegion 0 32.44 33.78 49.73 31.72 44.19 108.49 74.21 26 E8a_E9a KnownJunction 0 32.86 29.69 46.76 30.42 57.79 100.74 68.20 27 ER9a ExonRegion 0 25.53 15.19 30.41 19.45 51.78 57.45 61.49 28 E9a_E10a KnownJunction 0 23.42 5.70 25.88 13.06 37.35 22.30 37.71 29 ER10a ExonRegion 0 18.39 8.92 13.46 13.13 23.38 27.17 43.82 30 E10a_E11a KnownJunction 1 4.29 2.73 5.25 11.68 15.54 20.45 26.30 31 ER11a ExonRegion 0 2.46 2.13 3.12 2.89 4.86 8.69 10.17 32 E11a_E12a KnownJunction 0 1.92 1.10 6.06 0.00 2.35 8.55 6.48 33 I11_AR1 ActiveIntronRegion 0 2.83 2.43 6.63 3.28 10.70 3.68 4.54 34 I11_SR2 SilentIntronRegion 0 1.99 1.97 4.96 1.87 7.57 1.84 4.74 35 ER12a ExonRegion 0 8.58 2.77 6.79 3.02 9.64 9.00 13.20 36 E12a_E13a KnownJunction 0 8.86 1.44 5.14 2.76 20.54 9.54 10.78 37 E12a_E14a KnownJunction 0 0.85 0.00 0.00 0.00 2.26 1.26 3.83 38 I12_AR2 ActiveIntronRegion 0 3.90 0.00 4.52 2.23 10.21 3.28 7.66 39 I12_SR3 SilentIntronRegion 0 3.59 3.07 4.53 1.18 8.56 1.40 6.47 40 ER13a ExonRegion 0 18.13 8.81 16.35 5.69 26.11 20.35 23.67 41 E13a_E14a KnownJunction 0 22.45 16.73 22.72 10.70 15.28 31.62 33.99 42 ER14a ExonRegion 0 21.59 17.12 26.69 21.75 37.28 42.65 39.03 43 E14a_E15a KnownJunction 0 30.36 21.86 30.72 27.47 59.20 73.08 42.87 44 I14 Intron 0 7.09 2.94 8.88 5.10 10.76 6.34 8.46 45 I14_SR1 SilentIntronRegion 0 7.50 3.12 9.34 5.40 11.03 6.71 8.96 46 E15_Aa NovelBoundary 0 5.72 4.02 1.42 1.68 8.81 3.32 4.77 47 ER15a ExonRegion 0 12.26 19.26 17.38 22.11 39.49 61.51 22.51 48 E15_Da KnownBoundary 0 13.13 16.71 18.24 18.86 28.08 54.35 27.10 49 E15a_E15b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER15b ExonRegion 0 32.29 19.60 35.76 24.86 48.57 62.44 61.15 51 E15_Ab KnownBoundary 0 21.86 12.82 21.83 18.15 25.20 51.21 32.17 52 ER15c ExonRegion 0 13.02 9.45 10.80 10.99 12.92 38.94 22.19 53 E15_Db KnownBoundary 0 26.84 11.95 20.89 16.80 46.50 38.97 49.44 54 ER15d ExonRegion 0 3.68 2.58 5.98 5.36 7.53 9.89 9.51