Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CACNA1A	Gene	0	0.42	0.50	0.86	0.99	23.18	2.41	0.08
2	325084	Transcript	0	0.00	0.00	0.00	0.00	6.49	0.51	0.00
3	357018	Transcript	0	0.00	1.63	0.00	0.00	30.57	0.00	0.00
4	360228	Transcript	0	0	0	0	0	0	0	0
5	IG30_AR7	ActiveIntergenicRegion	0	4.49	3.16	2.17	0.31	9.25	2.16	1.27
6	IG30_AR5	ActiveIntergenicRegion	0	2.05	9.71	2.08	4.78	3.82	4.68	3.27
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	9.34	0.04	0.35
8	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	25.01	0.00	0.00
9	I1_SR2	SilentIntronRegion	0	0.00	0.00	0.00	0.00	7.61	0.00	0.00
10	I1_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	7.83	0.00	0.00
11	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	34.89	0.78	0.00
12	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	24.99	0.00	0.00
13	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	32.52	1.91	0.00
14	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	8.37	0.00	0.00
15	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	31.79	0.00	0.00
16	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	24.89	0.13	0.00
17	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	15.47	0.00	0.00
18	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	18.74	1.83	0.00
19	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	27.48	0.00	0.00
20	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	19.96	0.00	0.00
21	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	17.34	0.00	0.00
22	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	15.43	0.61	0.00
23	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	12.52	1.47	0.00
24	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	16.91	0.91	0.00
25	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	11.71	3.11	0.00
26	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	11.41	1.94	0.00
27	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	14.57	0.00	0.00
28	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	26.83	0.69	0.00
29	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	25.13	1.47	0.00
30	ER11a	ExonRegion	0	0.00	0.00	0.00	0.90	33.34	0.14	0.00
31	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	23.03	0.00	0.00
32	ER12a	ExonRegion	0	0.00	0.00	0.00	0.00	31.43	0.00	0.00
33	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	24.99	0.00	0.00
34	ER13a	ExonRegion	0	0.00	0.00	0.00	0.00	27.39	0.00	0.00
35	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	36.82	0.00	0.00
36	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	26.87	0.00	0.19
37	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	20.96	0.00	0.89
38	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	27.24	0.00	0.35
39	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	29.48	0.00	0.00
40	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	25.76	0.00	0.19
41	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	17.27	0.00	0.89
42	ER17a	ExonRegion	0	0.00	0.00	0.00	0.00	16.83	0.00	0.43
43	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	20.47	0.00	0.00
44	ER18a	ExonRegion	0	0.00	0.00	0.00	0.00	27.47	0.00	0.24
45	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	22.61	0.00	0.89
46	ER19a	ExonRegion	0	0.00	0.00	0.00	0.00	5.50	0.11	0.28
47	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	2.03	0.00	0.00
48	ER20a	ExonRegion	0	0.00	0.00	0.00	0.20	8.82	0.20	0.00
49	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	8.97	0.00	0.00
50	ER21a	ExonRegion	0	0.00	0.00	0.00	0.00	17.62	0.00	0.00
51	E21a_E22a	KnownJunction	0	0.00	0.00	0.00	0.00	20.54	0.00	0.00
52	ER22a	ExonRegion	0	0.00	0.00	0.00	0.51	30.96	0.72	0.00
53	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	1.46	35.13	0.00	0.00
54	ER23a	ExonRegion	0	0.00	0.00	0.00	0.48	33.06	0.00	0.00
55	E23a_E24a	KnownJunction	0	0.00	0.00	0.00	0.00	39.07	0.00	0.00
56	ER24a	ExonRegion	0	0.00	0.00	0.00	0.89	30.34	0.00	0.27
57	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	44.81	0.00	0.89
58	ER25a	ExonRegion	0	0.00	0.00	0.00	0.00	40.91	0.33	0.22
59	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	27.02	1.55	0.00
60	ER26a	ExonRegion	0	0.00	0.00	0.00	0.00	32.82	0.54	0.32
61	E26a_E27a	KnownJunction	0	0.00	0.00	0.00	0.00	36.98	1.31	0.00
62	ER27a	ExonRegion	0	0.00	0.00	0.00	0.00	38.08	1.15	0.00
63	E27a_E28a	KnownJunction	0	0.00	0.00	0.00	0.00	37.85	0.00	0.00
64	ER28a	ExonRegion	0	0.00	0.00	0.00	0.47	37.63	1.34	0.00
65	E28a_E29a	KnownJunction	0	0.00	0.00	0.00	0.00	41.08	0.00	0.00
66	ER29a	ExonRegion	0	0.29	0.00	0.00	0.00	34.42	1.75	0.00
67	E29a_E30a	KnownJunction	0	0.75	0.00	0.00	0.00	42.33	0.00	0.00
68	ER30a	ExonRegion	0	0.33	0.00	0.00	0.00	43.72	1.48	0.00
69	E30a_E31a	KnownJunction	0	1.03	0.00	0.00	0.00	50.19	2.52	0.00
70	ER31a	ExonRegion	0	0.38	0.00	0.06	0.00	44.55	2.26	0.00
71	E31a_E32a	KnownJunction	0	0.00	0.00	0.55	0.00	40.41	1.23	0.00
72	ER32a	ExonRegion	0	0.50	0.00	0.42	0.00	41.95	2.91	0.00
73	E32a_E33a	KnownJunction	0	0.00	0.00	0.00	0.00	49.68	2.71	0.00
74	ER33a	ExonRegion	0	0.00	0.00	0.83	0.00	50.63	1.52	0.00
75	E33a_E34a	KnownJunction	0	0.00	0.00	1.19	0.00	50.46	1.66	0.00
76	ER34a	ExonRegion	0	0.00	0.00	0.39	0.00	71.87	5.19	0.00
77	E34a_E35a	KnownJunction	0	0.00	0.00	0.00	0.00	48.94	0.00	0.00
78	ER35a	ExonRegion	0	0.39	0.00	0.00	0.00	58.41	1.78	0.00
79	E35a_E36a	KnownJunction	0	0.00	0.00	0.00	0.00	58.83	1.07	0.00
80	I35_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	8.91	0.00	0.00
81	ER36a	ExonRegion	0	0.46	0.00	0.00	0.00	53.93	0.09	0.00
82	E36_Da	NovelBoundary	0	0.00	0.00	0.00	1.00	17.96	0.00	0.00
83	E36a_E37a	KnownJunction	0	0.00	0.00	0.00	0.00	4.31	0.00	0.00
84	E36a_E38a	KnownJunction	0	0.00	0.00	0.00	0.00	2.26	0.00	0.00
85	E36a_E39a	NovelJunction	0	0.00	0.00	0.00	0.00	17.52	0.00	0.00
86	I36	Intron	0	0.00	0.22	0.00	0.22	8.77	0.00	0.00
87	I36_SR1	SilentIntronRegion	0	0.00	0.28	0.00	0.28	9.41	0.00	0.00
88	I36_AR1	ActiveIntronRegion	0	0.00	0.15	0.00	0.16	8.09	0.00	0.00
89	ER37a	ExonRegion	0	0.00	0.00	0.00	0.00	11.16	0.23	0.00
90	E37a_E39a	KnownJunction	0	0.00	0.00	0.00	0.00	3.99	1.31	0.00
91	ER38a	ExonRegion	0	0.00	0.00	0.00	0.00	6.76	0.00	0.00
92	E38a_E39a	KnownJunction	0	0.00	0.00	0.00	0.00	4.17	0.00	0.00
93	ER39a	ExonRegion	0	0.55	0.00	0.00	0.00	56.94	0.96	0.00
94	E39a_E40a	KnownJunction	0	0.00	0.00	0.00	0.00	41.59	1.50	0.00
95	ER40a	ExonRegion	0	0.00	0.00	0.00	0.00	43.52	0.58	0.38
96	E40a_E41a	KnownJunction	0	0.00	0.00	0.00	0.00	39.67	0.00	0.66
97	ER41a	ExonRegion	0	0.00	0.00	0.00	0.00	51.59	0.00	0.10
98	E41a_E42a	KnownJunction	0	0.00	0.00	0.00	0.00	69.69	0.00	0.00
99	ER42a	ExonRegion	0	0.00	0.00	0.00	0.00	35.62	0.39	0.00
100	E42a_E43a	KnownJunction	0	0.00	0.00	0.00	0.00	20.89	1.66	0.00
101	ER43a	ExonRegion	0	0.00	0.00	0.00	0.00	26.07	1.02	0.00
102	E43a_E44a	KnownJunction	0	0.00	0.00	0.00	0.00	24.04	1.23	0.00
103	ER44a	ExonRegion	0	0.00	0.46	0.00	0.00	22.88	0.00	0.00
104	E44a_E45a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
105	E44a_E46a	KnownJunction	0	0.00	1.63	0.00	0.00	30.57	0.00	0.00
106	ER45a	ExonRegion	0	0.00	0.00	0.00	0.00	4.05	0.00	0.00
107	E45a_E46a	KnownJunction	0	0.00	0.00	0.00	0.00	7.42	0.00	0.00
108	ER46a	ExonRegion	0	0.00	1.16	0.28	0.00	20.73	0.00	0.00
109	E46a_E47a	KnownJunction	0	0.00	1.00	0.00	0.00	13.26	0.00	0.00
110	ER47a	ExonRegion	0	0.00	0.03	0.00	0.00	8.41	0.00	0.00
111	E47a_E48a	KnownJunction	0	0.00	0.00	0.00	0.00	5.44	0.00	0.00
112	ER48a	ExonRegion	0	2.02	2.46	4.38	4.88	12.86	10.09	0.03