Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NDUFA11	Gene	0	13.67	71.59	22.91	74.88	32.41	61.43	63.29
2	308961	Transcript	0	20.45	96.55	30.92	100.69	36.75	85.16	86.91
3	ER1a	ExonRegion	0	1.65	3.22	2.30	7.18	11.28	7.12	5.48
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	Ix_AR2	ActiveIntronRegion	0	2.36	3.45	5.63	5.99	8.07	2.73	4.94
6	ER2a	ExonRegion	0	26.39	81.20	47.37	109.97	44.35	86.24	126.13
7	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	Ix	Intron	0	0.48	5.16	2.05	14.31	0.43	25.47	1.26
9	Ix_SR1	SilentIntronRegion	0	0.49	5.29	2.10	14.67	0.44	26.12	1.30
10	ER3a	ExonRegion	0	33.74	191.44	52.81	185.85	58.63	154.84	143.87
11	E3a_E4a	KnownJunction	0	61.05	262.16	77.96	269.29	87.35	241.55	227.67
12	Ix	Intron	0	15.15	12.97	11.29	11.77	11.57	6.70	10.64
13	Ix_AR1	ActiveIntronRegion	0	15.17	12.99	11.31	11.78	11.59	6.71	10.66
14	ER4a	ExonRegion	0	20.30	137.80	36.00	132.52	55.61	106.39	105.21