Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C19orf29	Gene	0	27.16	70.50	48.29	108.65	53.34	85.53	55.30
2	221899	Transcript	0	10.81	20.72	20.90	33.54	20.57	22.82	12.98
3	248420	Transcript	0	8.20	14.06	9.71	34.36	8.09	32.14	13.88
4	ER1a	ExonRegion	0	5.97	17.92	8.25	30.78	11.56	22.65	8.23
5	E1a_E2a	KnownJunction	0	10.73	38.46	19.13	64.59	4.17	39.50	16.87
6	ER2a	ExonRegion	0	18.85	60.91	35.00	82.19	28.27	70.19	34.65
7	E2a_E3a	KnownJunction	0	29.81	83.02	54.85	108.91	44.10	115.51	62.11
8	E2a_E5a	NovelJunction	1	0.00	1.16	0.00	0.00	0.00	7.91	0.00
9	Ix_AR6	ActiveIntronRegion	0	3.71	14.58	3.39	8.21	0.94	8.58	0.67
10	ER3a	ExonRegion	0	29.10	84.46	65.31	120.12	70.04	107.16	79.02
11	E3a_E4a	KnownJunction	0	25.30	76.42	66.84	108.17	89.68	75.41	75.04
12	E3a_E5a	NovelJunction	0	0.88	1.55	0.89	7.48	0.00	10.16	0.00
13	E4_Aa	NovelBoundary	0	0.87	22.83	1.39	16.44	4.45	12.68	4.40
14	ER4a	ExonRegion	0	26.51	98.81	67.20	145.67	79.02	86.90	90.61
15	E4a_E5a	KnownJunction	0	44.01	96.57	88.18	133.75	78.70	77.37	114.02
16	ER5a	ExonRegion	0	37.17	109.49	80.62	162.01	81.50	107.74	104.97
17	E5a_E6a	KnownJunction	0	59.17	125.29	94.31	173.11	79.62	149.06	101.61
18	E6_Aa	NovelBoundary	1	23.05	0.00	38.74	0.00	0.00	0.00	0.62
19	ER6a	ExonRegion	0	34.79	96.40	67.67	138.99	80.41	118.62	76.42
20	E6a_E7a	KnownJunction	0	19.48	58.82	46.49	115.79	36.35	108.49	56.08
21	ER7a	ExonRegion	0	29.44	70.86	59.26	127.87	52.16	98.87	66.44
22	E7a_E8a	KnownJunction	0	14.07	39.28	12.98	70.79	34.14	40.79	33.71
23	ER8a	ExonRegion	0	12.76	47.20	25.01	80.02	34.66	56.33	30.32
24	E8a_E9a	KnownJunction	0	9.11	36.83	21.54	76.97	21.51	49.93	28.75
25	ER9a	ExonRegion	0	18.70	59.35	24.54	90.94	52.04	70.23	37.44
26	E9a_E10a	KnownJunction	0	65.31	111.29	104.77	163.85	87.25	132.93	106.61
27	ER10a	ExonRegion	0	49.50	115.49	79.72	171.60	96.55	139.72	101.90
28	E10_Da	NovelBoundary	0	25.25	66.49	39.95	89.18	26.70	72.44	46.99
29	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E10_Db	NovelBoundary	0	10.65	29.61	24.47	52.94	32.04	41.08	29.47
31	E10b_E12b	KnownJunction	1	1.64	12.64	4.84	41.88	4.15	47.52	11.48
32	ER10b	ExonRegion	0	16.04	27.68	17.35	56.87	12.61	41.79	26.93
33	Ix	Intron	0	11.46	43.09	23.13	47.77	29.99	30.21	24.22
34	Ix_AR1	ActiveIntronRegion	0	11.50	43.25	23.21	47.96	30.10	30.33	24.31
35	E11_Aa	NovelBoundary	0	15.25	34.47	33.84	76.83	34.95	76.67	35.47
36	ER11a	ExonRegion	0	9.34	33.01	17.80	45.86	34.03	25.92	17.05
37	E11_Da	NovelBoundary	0	21.66	50.97	39.99	79.95	53.74	70.64	37.79
38	E11a_E12a	KnownJunction	0	0.00	0.00	0.50	0.00	0.00	0.00	0.00
39	Ix	Intron	0	12.12	39.17	26.27	43.38	30.86	39.01	15.68
40	Ix_AR1	ActiveIntronRegion	0	12.24	39.61	26.57	43.88	31.21	39.48	15.88
41	E12_Aa	NovelBoundary	0	28.79	73.69	36.37	113.02	46.13	74.99	40.97
42	ER12a	ExonRegion	1	33.90	49.87	65.29	88.31	48.25	65.37	34.88
43	E12_Ab	KnownBoundary	0	28.56	64.15	62.42	135.70	31.12	101.20	43.01
44	ER12b	ExonRegion	0	30.90	52.49	46.09	103.32	35.31	93.81	36.58
45	ER12c	ExonRegion	0	6.92	1.86	6.95	4.32	7.50	7.11	3.24