Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HMG20B	Gene	0	153.93	118.75	86.21	114.73	145.11	120.95	159.05
2	333651	Transcript	0	2.42	0.68	1.26	0.98	2.79	1.49	1.15
3	262949	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	402569	Transcript	0	2.34	1.44	4.53	0.00	0.00	3.32	0.00
5	405446	Transcript	0	84.64	70.93	43.55	68.11	15.58	69.96	89.19
6	ER1a	ExonRegion	0	1.44	0.15	0.00	0.00	0.61	1.23	0.76
7	ER1b	ExonRegion	0	13.22	9.23	4.99	4.63	12.52	6.20	10.74
8	E1a_E2a	KnownJunction	0	61.37	28.48	25.15	31.29	48.92	24.25	59.40
9	ER1c	ExonRegion	0	28.05	18.05	9.48	21.91	33.55	19.09	28.86
10	ER2a	ExonRegion	0	22.79	16.70	7.17	26.03	17.73	27.41	25.69
11	E2a_E3a	KnownJunction	1	15.86	12.35	3.18	13.46	4.15	33.82	6.92
12	ER3a	ExonRegion	0	28.88	36.55	14.80	42.84	33.49	44.39	34.13
13	E3_Da	NovelBoundary	1	53.07	26.09	12.78	33.08	3.14	58.93	39.90
14	E3a_E4a	KnownJunction	0	44.51	62.58	25.58	66.05	68.08	72.28	74.98
15	Ix	Intron	1	63.18	26.96	19.78	35.91	11.47	39.59	48.86
16	Ix_AR1	ActiveIntronRegion	0	63.43	27.06	19.86	36.05	11.52	39.75	49.06
17	ER4a	ExonRegion	0	113.05	109.23	64.44	98.64	109.38	112.46	144.80
18	E4_Da	KnownBoundary	0	133.12	142.36	72.27	132.94	86.82	156.27	144.19
19	E4a_E4b	KnownJunction	0	2.34	1.44	4.53	0.00	0.00	3.32	0.00
20	ER4b	ExonRegion	0	124.57	144.07	74.96	130.42	139.14	139.90	148.20
21	E4b_E5a	KnownJunction	0	166.42	167.30	102.63	142.53	252.64	222.41	246.33
22	ER4c	ExonRegion	0	151.73	163.42	97.99	145.81	221.31	192.90	230.76
23	ER5a	ExonRegion	0	194.22	177.49	143.57	169.43	245.00	185.21	274.89
24	E5a_E6a	KnownJunction	0	186.24	160.39	136.14	138.57	239.47	163.56	242.82
25	E5a_E7b	NovelJunction	0	4.81	3.78	4.33	7.23	0.97	13.75	4.21
26	ER6a	ExonRegion	0	211.81	191.77	140.87	155.79	324.47	208.08	304.49
27	E6a_E7b	KnownJunction	0	196.06	175.26	124.23	148.62	359.58	198.08	281.78
28	ER7a	ExonRegion	0	21.26	18.73	12.81	14.03	31.65	20.33	32.38
29	ER7b	ExonRegion	0	279.72	222.30	179.10	211.39	323.87	220.85	336.29
30	E7a_E8a	KnownJunction	0	276.92	190.52	172.42	181.59	278.22	188.64	256.66
31	E8a_E8b	KnownJunction	0	132.37	81.97	64.77	83.06	0.00	78.66	124.01
32	E8_Ab	NovelBoundary	0	337.09	246.32	191.08	196.30	324.75	228.66	299.34
33	ER8a	ExonRegion	0	334.24	238.87	196.98	217.18	301.03	215.26	313.43
34	ER8b	ExonRegion	0	341.49	255.12	198.20	207.00	306.93	213.81	314.09
35	ER8c	ExonRegion	0	211.80	179.05	114.77	167.57	223.46	150.16	224.44
36	E8b_E9a	KnownJunction	0	242.59	111.50	117.97	113.70	121.60	111.78	193.83
37	ER9a	ExonRegion	0	226.37	118.47	114.62	139.49	195.00	121.23	200.19
38	E9a_E11a	KnownJunction	0	280.81	121.79	139.55	118.50	145.99	142.28	195.92
39	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER11a	ExonRegion	0	144.81	123.77	89.03	110.22	119.52	127.11	153.19
41	E11_Da	KnownBoundary	0	56.93	58.56	32.95	44.78	63.88	62.66	82.59
42	E11a_E11b	KnownJunction	0	68.88	100.23	42.84	98.83	0.00	76.38	103.50
43	E11_Ab	KnownBoundary	0	102.38	58.40	65.23	64.18	66.37	67.59	88.70
44	ER11b	ExonRegion	0	163.37	140.68	95.51	130.93	139.46	139.27	164.74
45	ER11c	ExonRegion	0	300.01	151.28	152.15	144.14	167.61	170.59	212.77
46	E11_Db	KnownBoundary	0	125.64	95.63	69.28	46.84	77.16	65.12	102.76
47	E11b_E11c	KnownJunction	0	101.12	59.79	45.28	59.84	0.00	70.78	75.88
48	E11_Ac	KnownBoundary	0	63.39	47.16	27.59	49.60	53.21	56.15	67.31
49	ER11d	ExonRegion	0	201.33	136.27	98.79	118.88	128.50	135.06	174.27
50	ER11e	ExonRegion	0	146.47	120.02	71.36	121.40	89.13	133.54	152.90
51	E11_Dc	KnownBoundary	1	31.16	33.89	12.66	40.56	26.19	37.39	45.23
52	E11c_E11d	KnownJunction	0	99.59	93.95	52.03	84.77	46.24	103.66	110.15
53	E11_Ad	KnownBoundary	0	73.45	63.52	47.44	54.83	33.01	76.92	71.90
54	ER11f	ExonRegion	0	122.69	127.56	67.29	118.05	89.35	144.26	152.68
55	ER11g	ExonRegion	0	147.94	104.80	68.22	107.05	103.34	109.76	104.48
56	E11_Dd	KnownBoundary	0	159.59	67.83	56.56	92.57	46.75	96.05	88.12
57	ER11h	ExonRegion	0	60.21	43.95	23.54	47.41	42.30	53.42	44.23
58	ER11i	ExonRegion	0	3.40	1.21	2.52	1.96	4.97	1.75	1.54