Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	THOC1	Gene	0	88.57	90.74	176.33	151.59	218.18	162.91	44.62
2	261600	Transcript	0	92.94	88.95	183.86	145.41	221.20	155.99	42.90
3	IG5_AR9	ActiveIntergenicRegion	0	0.11	0.78	0.14	0.48	1.11	14.55	0.00
4	IG5_AR8	ActiveIntergenicRegion	0	0.32	0.93	0.01	0.47	0.80	17.26	0.00
5	IG5_SR7	SilentIntergenicRegion	0	0.02	0.00	0.53	1.23	1.07	13.11	0.00
6	IG5_AR7	ActiveIntergenicRegion	0	0.45	0.47	0.39	3.36	1.05	21.96	0.13
7	IG5_SR6	SilentIntergenicRegion	0	0.00	0.00	0.39	0.72	0.31	11.19	0.00
8	IG5_AR6	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	10.87	0.00
9	ER1a	ExonRegion	0	70.66	24.00	99.71	39.62	157.00	53.59	18.23
10	E1a_E2a	KnownJunction	0	94.38	32.97	118.05	54.91	117.94	86.67	28.51
11	ER2a	ExonRegion	0	42.94	58.94	61.43	62.79	66.87	84.84	19.50
12	E2a_E3a	KnownJunction	0	33.40	98.36	59.68	111.40	43.11	144.99	15.74
13	ER3a	ExonRegion	0	131.73	109.28	219.63	146.61	144.31	181.27	39.83
14	E3a_E4a	KnownJunction	0	192.62	117.77	320.40	160.98	334.31	179.37	55.32
15	E3a_E5a	NovelJunction	0	3.67	5.81	7.47	16.28	0.00	11.15	0.00
16	I3_SR2	SilentIntronRegion	0	24.42	4.33	32.75	2.94	13.05	0.84	4.63
17	ER4a	ExonRegion	0	119.89	118.57	220.53	170.01	399.26	175.35	43.87
18	E4a_E5a	KnownJunction	0	74.59	108.45	157.69	181.43	205.72	180.01	29.85
19	I4_SR2	SilentIntronRegion	0	19.10	7.55	28.74	3.29	20.82	4.69	3.48
20	E5_Aa	NovelBoundary	1	44.03	12.37	93.77	5.42	10.93	2.52	3.60
21	ER5a	ExonRegion	0	95.06	99.53	200.84	191.20	181.77	177.91	36.92
22	E5a_E6a	KnownJunction	0	99.52	65.97	188.84	145.86	221.81	152.30	34.95
23	E5a_E7a	NovelJunction	1	7.94	0.00	6.32	9.48	0.00	1.63	0.00
24	ER6a	ExonRegion	0	116.39	79.56	238.55	184.09	260.54	176.59	47.07
25	E6a_E7a	KnownJunction	0	108.05	81.78	244.68	182.35	271.31	171.89	48.80
26	ER7a	ExonRegion	0	128.13	111.07	251.77	215.76	304.29	202.46	50.74
27	E7a_E8a	KnownJunction	0	128.01	94.60	220.70	182.70	301.07	162.11	45.40
28	E7a_E9a	NovelJunction	0	4.57	20.49	9.08	28.42	1.13	36.93	1.75
29	ER8a	ExonRegion	0	163.98	110.55	285.37	231.48	381.75	182.26	61.07
30	E8a_E9a	KnownJunction	0	125.93	119.88	253.45	213.48	303.31	192.21	54.20
31	ER9a	ExonRegion	0	114.40	127.51	224.77	205.39	276.19	179.29	51.67
32	E9a_E10a	KnownJunction	0	119.45	111.00	182.10	170.21	260.80	118.62	39.87
33	ER10a	ExonRegion	0	114.60	115.27	208.81	157.87	292.95	129.93	49.67
34	E10a_E11a	KnownJunction	0	98.84	101.20	216.59	154.64	296.57	131.88	49.82
35	ER11a	ExonRegion	0	102.90	94.08	222.39	143.48	240.11	128.50	48.50
36	E11a_E12a	KnownJunction	0	116.86	61.40	257.90	97.34	196.06	118.99	47.32
37	I11_AR2	ActiveIntronRegion	0	18.40	13.46	35.70	22.50	12.79	26.64	4.31
38	ER12a	ExonRegion	0	112.77	83.73	228.67	144.08	215.12	149.79	50.02
39	E12a_E13a	KnownJunction	0	75.49	76.55	178.64	147.81	182.44	151.98	44.11
40	ER13a	ExonRegion	0	78.56	62.54	213.10	126.93	219.26	138.04	52.01
41	E13_Da	NovelBoundary	0	64.01	62.26	119.45	68.05	83.80	96.85	19.53
42	E13a_E14a	KnownJunction	0	65.61	40.56	184.16	74.55	203.10	88.84	42.91
43	I13	Intron	0	24.94	33.68	48.45	28.76	38.58	35.91	8.06
44	I13_AR1	ActiveIntronRegion	0	25.19	34.00	48.88	28.99	38.92	36.28	8.13
45	E14_Aa	NovelBoundary	0	37.64	33.81	77.05	38.90	49.66	64.35	16.40
46	ER14a	ExonRegion	0	72.70	58.41	159.85	97.73	159.84	113.30	45.90
47	E14a_E15a	KnownJunction	0	75.10	78.74	144.45	131.07	154.87	155.33	35.80
48	ER15a	ExonRegion	0	66.94	83.57	155.08	119.50	161.77	171.55	35.69
49	E15_Da	NovelBoundary	0	36.42	6.83	83.32	5.20	4.61	2.84	9.53
50	E15a_E16a	KnownJunction	0	62.82	81.15	146.61	107.47	134.31	148.36	33.49
51	ER16a	ExonRegion	0	78.44	81.55	180.88	124.47	182.55	143.26	50.07
52	E16a_E17a	KnownJunction	0	76.42	78.24	158.23	97.42	188.39	137.78	49.27
53	ER17a	ExonRegion	0	69.33	82.98	152.62	129.76	189.90	163.39	40.62
54	E17a_E18a	KnownJunction	0	66.69	76.34	138.39	140.85	229.70	145.92	34.77
55	E18_Aa	NovelBoundary	0	37.32	51.94	60.57	30.53	29.07	53.06	25.60
56	ER18a	ExonRegion	0	87.92	102.29	189.71	148.63	213.69	163.55	47.42
57	E18a_E19a	KnownJunction	0	88.64	135.38	191.50	174.79	245.03	194.46	46.48
58	E18a_E20a	NovelJunction	0	0.85	1.50	1.24	9.83	0.00	1.66	0.00
59	ER19a	ExonRegion	0	93.70	113.01	181.15	163.26	244.31	216.82	51.63
60	E19_Da	NovelBoundary	1	38.87	12.08	49.78	21.13	23.54	18.01	4.63
61	E19a_E20a	KnownJunction	0	64.37	101.28	111.97	134.45	187.90	169.29	38.91
62	I19_AR1	ActiveIntronRegion	0	24.88	8.22	38.52	15.57	16.21	8.28	6.73
63	I19_SR2	SilentIntronRegion	1	13.94	6.41	27.35	19.35	11.81	25.37	11.24
64	E20_Aa	NovelBoundary	0	7.23	9.17	22.78	14.11	9.11	29.13	13.20
65	ER20a	ExonRegion	0	60.69	89.85	129.00	158.76	249.42	211.81	47.44
66	E20a_E21a	KnownJunction	0	69.55	94.26	134.79	177.53	280.51	237.02	51.88
67	ER21a	ExonRegion	0	52.29	84.81	105.46	158.96	169.88	183.96	43.72
68	IG4	Intergenic	0	68.69	76.65	101.09	83.41	263.38	119.90	129.34
69	IG4_AR1	ActiveIntergenicRegion	0	68.93	76.91	101.43	83.69	264.27	120.31	129.78