Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C17orf42	Gene	0	24.81	15.03	36.43	12.89	91.08	13.53	35.94
2	306049	Transcript	0	26.54	15.39	34.86	12.46	75.31	12.70	36.85
3	ER1a	ExonRegion	0	19.04	15.69	25.70	9.43	86.56	8.98	37.94
4	E1a_E2a	KnownJunction	0	24.42	21.04	34.22	15.25	21.02	12.81	52.97
5	ER2a	ExonRegion	0	24.81	20.90	40.41	16.51	61.36	14.74	36.48
6	E2a_E3a	KnownJunction	0	34.88	22.80	40.34	14.36	78.82	13.16	28.19
7	I2	Intron	1	1.28	1.33	3.12	0.68	3.14	0.49	8.13
8	I2_AR1	ActiveIntronRegion	1	0.44	1.22	2.75	0.18	1.95	0.53	7.55
9	I2_AR2	ActiveIntronRegion	1	1.74	1.86	3.84	1.01	3.67	0.45	10.19
10	I2_SR2	SilentIntronRegion	1	0.93	2.43	4.63	0.82	5.46	2.56	9.05
11	I2_AR3	ActiveIntronRegion	1	2.35	0.52	2.05	1.05	3.80	0.00	7.74
12	ER3a	ExonRegion	0	24.85	11.59	39.76	14.60	70.17	11.93	37.52
13	E3_Da	NovelBoundary	0	9.33	5.49	10.71	1.06	11.46	3.22	11.87
14	E3a_E4a	KnownJunction	0	32.38	4.33	29.80	6.96	90.25	13.80	29.91
15	I3	Intron	1	3.09	1.21	6.18	1.12	7.67	2.55	8.79
16	I3_AR1	ActiveIntronRegion	1	3.10	1.21	6.20	1.12	7.69	2.55	8.81
17	ER4a	ExonRegion	0	25.43	11.39	33.82	10.14	118.96	13.50	34.93
18	IG29	Intergenic	0	1.44	0.60	3.26	1.47	17.86	1.07	2.75
19	IG29_AR4	ActiveIntergenicRegion	0	0.66	0.00	2.19	0.84	24.20	0.41	0.90
20	IG29_AR3	ActiveIntergenicRegion	0	1.42	1.28	4.56	2.33	14.82	1.63	4.64
21	IG29_SR1	SilentIntergenicRegion	0	1.58	0.32	3.15	1.27	14.73	0.67	2.17
22	IG29_AR2	ActiveIntergenicRegion	0	5.73	2.30	7.90	4.44	46.23	4.54	9.14
23	IG29_AR1	ActiveIntergenicRegion	0	0.00	0.00	1.42	0.00	16.23	0.00	0.00