Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 SLC5A10 Gene 0 0.35 0.30 0.29 0.54 0.87 0.15 0.06 2 317977 Transcript 0 1.72 0.25 0.79 1.81 5.03 0.25 0.27 3 395642 Transcript 0 0 0 0 0 0 0 0 4 395647 Transcript 0 0 0 0 0 0 0 0 5 395643 Transcript 0 0 0 0 0 0 0 0 6 395645 Transcript 0 0 0 0 0 0 0 0 7 284168 Transcript 0 21.20 137.11 29.72 164.12 12.79 48.32 35.14 8 ER1a ExonRegion 0 3.45 0.50 1.58 3.62 10.06 0.51 0.54 9 E1_Da NovelBoundary 0 820.18 417.69 488.13 319.32 132.42 232.11 209.85 10 E1a_E2b NovelJunction 0 12.73 8.14 8.61 8.05 14.02 8.04 4.44 11 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E2_Ab NovelBoundary 0 0.00 0.00 0.00 10.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3_Aa NovelBoundary 0 4.06 8.83 3.69 13.82 0.00 16.94 0.62 17 ER3a ExonRegion 0 0.54 1.18 0.00 1.21 0.00 0.00 0.00 18 E3_Da NovelBoundary 0 2.50 5.25 6.97 11.81 0.00 8.52 1.63 19 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 I3 Intron 0 1.11 3.34 1.04 8.02 0.16 5.29 0.42 21 I3_SR1 SilentIntronRegion 0 1.12 3.36 1.04 8.08 0.16 5.33 0.42 22 E4_Aa NovelBoundary 0 0.62 4.33 3.75 16.23 0.00 11.23 0.00 23 ER4a ExonRegion 0 0.56 0.88 0.00 0.90 0.00 1.69 0.00 24 E4_Da NovelBoundary 0 3.47 9.90 1.25 18.45 0.00 10.43 0.00 25 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 I4 Intron 0 0.68 5.77 1.32 8.46 0.16 6.89 0.20 27 I4_SR1 SilentIntronRegion 0 0.69 5.81 1.33 8.53 0.16 6.95 0.20 28 E5_Aa NovelBoundary 0 1.65 4.89 1.18 8.21 0.00 6.22 0.57 29 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.61 0.00 30 ER5b ExonRegion 0 0.00 0.02 0.00 0.04 0.00 0.00 0.00 31 E5_Da NovelBoundary 0 3.62 3.49 3.82 14.30 0.00 6.24 0.00 32 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 E6_Aa NovelBoundary 0 1.62 4.05 5.04 13.49 0.00 3.11 0.00 34 ER6a ExonRegion 0 0.00 2.63 1.45 4.44 0.00 0.89 0.00 35 E6_Da NovelBoundary 0 0.63 6.86 1.39 13.68 0.00 6.94 0.62 36 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 I6 Intron 0 1.73 4.74 3.28 8.16 0.13 3.70 0.57 38 I6_SR2 SilentIntronRegion 0 1.90 5.18 3.53 8.97 0.16 3.98 0.64 39 E7_Aa NovelBoundary 0 20.48 172.45 20.22 169.54 43.62 73.46 44.16 40 E7a_E7b KnownJunction 0 21.20 137.11 29.72 164.12 12.79 48.32 35.14 41 E7_Ab NovelBoundary 0 29.34 203.16 45.70 228.65 30.06 67.19 52.48 42 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER7b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER7c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E7_Db NovelBoundary 0 33.10 265.76 71.00 349.42 38.31 141.53 84.90 46 E7b_E8a KnownJunction 0 4.09 0.00 10.56 0.00 0.00 0.00 0.00 47 E7b_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E8_Aa NovelBoundary 0 15.74 177.12 48.34 218.68 31.70 72.01 48.73 49 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 E8_Da NovelBoundary 0 51.67 339.16 91.27 391.95 66.55 128.02 133.84 51 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 E9_Aa NovelBoundary 0 114.71 285.68 143.89 301.52 94.86 78.28 119.75 53 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E9_Da NovelBoundary 0 40.66 237.02 77.43 278.88 79.60 73.59 105.49 55 E9a_E10a KnownJunction 0 2.34 0.00 4.02 0.00 0.00 0.00 0.00 56 E10_Aa NovelBoundary 0 7.09 16.97 12.01 32.35 2.90 7.66 5.16 57 ER10a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 E10_Da NovelBoundary 0 4.54 31.08 12.50 21.48 4.15 8.25 5.50 59 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 E10a_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 E11_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER11b ExonRegion 0 0.00 0.00 0.00 0.00 0.39 0.00 0.00 64 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER12a ExonRegion 0 0.00 0.00 0.65 0.00 0.27 0.00 0.00 66 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67 E12a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 ER13a ExonRegion 0 0.00 0.00 0.46 0.00 0.00 0.00 0.00 69 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 ER14a ExonRegion 0 0.00 0.00 0.61 0.00 0.03 0.00 0.00 71 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.69 72 ER15a ExonRegion 0 0.00 0.78 0.00 0.00 0.36 0.00 0.00 73 E15a_E16a KnownJunction 0 0.00 1.10 0.00 0.00 0.00 0.00 0.00 74 ER16a ExonRegion 0 0.36 0.23 0.00 0.00 0.07 0.00 0.00 75 E16a_E17a KnownJunction 0 0.97 0.00 0.00 0.00 0.00 0.00 0.00 76 ER17a ExonRegion 0 0.35 0.00 0.00 0.00 0.92 0.00 0.38 77 E17_Da KnownBoundary 0 0.87 0.00 0.00 0.00 1.11 0.00 0.66 78 ER17b ExonRegion 0 0.23 0.00 0.00 0.00 0.07 0.00 0.04 79 ER17c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00