Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	WWP2	Gene	0	51.24	57.92	62.96	58.24	82.08	50.38	62.05
2	359154	Transcript	0	12.73	11.22	10.32	10.37	31.97	6.15	17.68
3	356003	Transcript	0	1.73	2.13	3.10	1.97	4.59	1.02	4.05
4	ER1a	ExonRegion	0	10.68	6.89	8.10	6.70	46.32	3.65	14.06
5	E1a_E2b	KnownJunction	0	26.75	26.77	20.84	21.92	47.97	14.79	37.63
6	ER2a	ExonRegion	0	1.73	2.13	3.10	1.97	4.59	1.02	4.05
7	ER2b	ExonRegion	1	21.27	40.50	30.92	35.40	34.41	15.37	42.80
8	E2a_E3a	KnownJunction	1	25.08	51.86	28.30	32.02	21.60	17.47	41.93
9	ER3a	ExonRegion	1	55.20	84.57	75.45	63.22	98.55	30.63	80.75
10	E3a_E4a	KnownJunction	1	57.58	96.00	81.44	74.64	158.28	24.82	94.27
11	ER4a	ExonRegion	1	63.55	116.08	103.12	75.95	117.71	31.64	103.29
12	E4a_E5a	KnownJunction	1	82.68	126.79	129.59	87.64	104.48	27.68	140.28
13	ER5a	ExonRegion	1	74.39	108.00	116.26	75.22	99.44	21.70	123.71
14	E5a_E6a	KnownJunction	1	58.90	95.42	120.05	71.22	102.61	31.92	132.62
15	ER6a	ExonRegion	1	66.15	93.26	104.16	62.59	137.81	25.06	127.08
16	E6a_E7a	KnownJunction	1	81.26	93.97	102.04	37.41	114.25	24.87	126.17
17	ER7a	ExonRegion	1	40.63	73.51	56.39	57.12	66.74	29.05	74.83
18	E7a_E8a	KnownJunction	1	27.91	69.96	41.33	52.12	41.26	29.00	89.04
19	ER8a	ExonRegion	0	38.96	66.41	49.64	64.64	63.08	28.30	79.00
20	E8a_E9a	KnownJunction	1	41.54	50.31	40.64	39.26	59.50	16.11	68.73
21	ER9a	ExonRegion	0	42.88	49.50	53.82	42.11	68.69	20.04	66.15
22	E9_Da	NovelBoundary	1	18.06	32.89	13.85	19.37	5.16	4.15	27.01
23	E9a_E10a	KnownJunction	0	25.70	38.28	39.46	31.34	44.68	20.29	39.23
24	I9	Intron	1	15.35	12.29	9.51	10.65	8.03	3.88	15.02
25	I9_AR1	ActiveIntronRegion	1	43.84	37.45	28.42	33.38	21.23	12.88	42.31
26	ER10a	ExonRegion	1	28.76	40.83	42.06	32.71	51.23	12.68	46.29
27	E10a_E11a	KnownJunction	1	35.20	38.59	51.81	30.53	55.30	13.51	51.89
28	I10_AR2	ActiveIntronRegion	0	1.25	5.11	0.64	7.36	0.25	12.41	0.78
29	E11_Aa	NovelBoundary	1	2.39	9.01	2.04	18.53	1.18	45.85	2.95
30	ER11a	ExonRegion	0	30.79	42.21	43.67	29.90	46.26	23.61	49.34
31	E11a_E12a	KnownJunction	0	24.00	34.70	36.23	30.99	35.09	37.71	42.98
32	I11_AR1	ActiveIntronRegion	0	17.99	2.62	15.35	10.14	1.37	8.89	7.66
33	ER12a	ExonRegion	0	43.46	42.56	60.58	56.10	78.34	56.72	47.32
34	E12a_E13a	KnownJunction	0	59.03	48.58	79.11	64.67	87.69	44.49	55.99
35	ER13a	ExonRegion	0	60.09	54.90	73.71	80.50	83.36	67.87	62.10
36	E13a_E14a	KnownJunction	0	58.35	55.56	65.74	81.95	73.49	85.01	58.29
37	ER14a	ExonRegion	0	74.19	72.72	84.53	78.58	111.65	80.96	66.55
38	E14a_E15a	KnownJunction	0	82.53	71.93	98.31	71.28	176.12	89.83	77.09
39	ER15a	ExonRegion	0	91.00	74.31	111.47	83.63	157.61	78.38	93.64
40	E15a_E16a	KnownJunction	0	102.83	76.16	119.36	82.87	141.24	71.88	90.03
41	ER16a	ExonRegion	0	77.59	68.65	80.75	58.93	102.94	62.43	70.41
42	E16a_E17a	KnownJunction	0	64.57	50.84	73.15	37.76	100.40	48.78	71.31
43	ER17a	ExonRegion	0	94.72	65.72	115.80	65.46	128.15	63.18	91.08
44	E17a_E18a	KnownJunction	0	81.43	58.95	104.67	62.80	123.77	64.64	68.56
45	ER18a	ExonRegion	0	73.60	69.82	89.95	59.61	114.58	65.10	78.94
46	E18a_E19a	KnownJunction	0	64.79	76.77	83.84	65.97	98.23	85.76	72.39
47	ER19a	ExonRegion	0	61.53	68.29	80.49	64.44	120.98	70.99	81.38
48	E19a_E20a	KnownJunction	0	54.63	71.96	78.94	49.66	140.85	64.91	87.11
49	ER20a	ExonRegion	0	51.12	72.43	62.66	79.61	127.05	67.57	79.71
50	E20a_E21a	KnownJunction	0	46.60	62.32	56.09	99.56	116.39	63.11	91.28
51	ER21a	ExonRegion	0	57.63	74.00	85.00	86.33	135.40	70.85	91.26
52	E21_Da	NovelBoundary	1	25.45	2.10	29.70	0.00	0.00	0.00	0.00
53	E21a_E22a	KnownJunction	0	61.97	65.05	86.51	102.57	141.31	71.47	92.95
54	ER22a	ExonRegion	0	66.09	72.55	76.84	98.34	141.03	48.53	84.03
55	E22a_E23a	KnownJunction	0	64.61	61.76	74.22	86.23	90.27	47.17	85.26
56	ER23a	ExonRegion	0	45.16	61.01	61.30	82.57	76.60	53.24	72.28
57	E23a_E24a	KnownJunction	0	48.27	49.23	53.43	66.67	109.52	44.46	57.17
58	ER24a	ExonRegion	0	45.54	44.77	48.93	51.99	63.71	59.88	41.99
59	ER24b	ExonRegion	0	0.77	0.00	2.03	2.49	1.62	0.00	1.35