Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CHD9	Gene	0	96.97	65.54	122.57	100.31	63.87	54.78	53.60
2	219084	Transcript	0	104.13	63.16	124.44	97.11	62.69	46.45	49.35
3	398510	Transcript	0	3.42	3.02	1.36	0.96	0.00	0.98	0.70
4	IG14_AR4	ActiveIntergenicRegion	0	2.28	0.44	3.53	0.18	11.52	0.00	1.78
5	IG14_SR4	SilentIntergenicRegion	0	1.32	0.00	2.61	0.33	8.60	0.00	1.11
6	IG14_AR6	ActiveIntergenicRegion	0	13.34	3.72	23.38	4.71	47.79	0.15	3.44
7	ER1a	ExonRegion	0	4.61	1.21	6.02	4.46	1.28	0.00	0.90
8	E1a_E3a	KnownJunction	0	11.02	2.63	13.90	8.07	1.18	0.00	2.19
9	ER2a	ExonRegion	0	3.68	4.98	2.72	1.91	0.00	1.96	1.39
10	E2a_E3a	KnownJunction	0	3.15	1.05	0.00	0.00	0.00	0.00	0.00
11	I2_AR3	ActiveIntronRegion	0	7.61	13.41	6.55	6.94	13.00	6.25	6.32
12	ER3a	ExonRegion	0	74.33	82.05	119.60	102.42	17.01	53.00	42.44
13	E3a_E4a	KnownJunction	0	47.67	78.68	66.89	119.12	9.98	48.45	40.29
14	I3_AR10	ActiveIntronRegion	0	7.97	3.98	9.87	3.19	14.83	0.73	3.74
15	ER4a	ExonRegion	0	61.90	69.81	90.98	98.43	40.27	47.15	47.45
16	E4a_E5a	KnownJunction	0	101.51	39.75	128.10	71.36	37.99	26.56	45.39
17	ER5a	ExonRegion	0	111.77	58.20	133.12	85.27	38.92	39.80	41.88
18	E5a_E6a	KnownJunction	0	106.70	59.64	139.82	71.28	22.91	47.54	33.39
19	ER6a	ExonRegion	0	109.72	56.20	149.59	79.35	30.18	44.52	37.78
20	ER6b	ExonRegion	1	137.25	43.33	150.01	65.87	62.97	40.86	36.70
21	E6b_E7a	KnownJunction	1	141.76	42.72	121.77	56.84	62.68	47.03	31.53
22	ER7a	ExonRegion	1	147.22	67.63	152.02	82.48	65.70	54.69	34.52
23	E7a_E8a	KnownJunction	1	165.15	81.73	194.76	111.05	56.69	55.07	35.43
24	ER8a	ExonRegion	1	180.95	77.25	195.46	111.05	73.65	63.88	44.15
25	E8a_E9a	KnownJunction	0	154.40	63.92	141.88	76.34	102.40	47.68	44.05
26	ER9a	ExonRegion	0	110.96	55.05	131.52	72.00	64.52	40.42	35.08
27	E9a_E10a	KnownJunction	0	91.04	62.11	113.93	68.81	63.99	32.32	30.11
28	ER10a	ExonRegion	0	95.57	51.64	116.39	67.21	49.34	34.26	41.57
29	E10a_E11a	KnownJunction	0	97.32	55.75	104.92	66.35	51.59	30.79	46.62
30	ER11a	ExonRegion	0	145.33	69.47	147.62	95.70	65.23	61.05	50.62
31	E11a_E12a	KnownJunction	0	176.03	82.28	184.92	101.27	79.39	70.78	55.09
32	ER12a	ExonRegion	0	155.50	70.97	154.95	96.49	64.99	48.12	46.35
33	E12a_E13a	KnownJunction	1	119.92	58.69	128.08	85.91	42.03	28.84	33.52
34	ER13a	ExonRegion	0	82.68	57.56	106.98	81.28	54.08	34.68	37.95
35	E13a_E14a	KnownJunction	0	51.89	50.39	71.29	76.67	41.93	32.29	30.15
36	ER14a	ExonRegion	0	64.07	60.34	84.98	79.09	41.33	27.66	40.24
37	E14a_E15a	KnownJunction	0	64.52	52.60	110.78	78.89	44.72	33.15	43.50
38	ER15a	ExonRegion	0	74.98	61.05	107.36	90.18	39.44	48.08	46.60
39	E15a_E16a	KnownJunction	0	70.15	62.74	117.20	106.17	35.82	53.49	47.04
40	ER16a	ExonRegion	0	62.19	51.17	91.52	75.29	38.27	37.83	37.66
41	E16a_E17a	KnownJunction	0	77.86	43.24	91.87	52.80	28.89	30.15	36.93
42	ER17a	ExonRegion	0	114.23	56.63	134.05	92.48	59.59	43.90	39.80
43	E17a_E18a	KnownJunction	0	125.53	53.28	122.00	104.08	52.77	41.06	47.34
44	ER18a	ExonRegion	0	80.12	51.87	96.79	71.08	51.33	32.19	39.94
45	E18a_E19a	KnownJunction	0	39.02	35.44	78.74	46.46	52.98	22.40	46.22
46	ER19a	ExonRegion	0	35.46	51.80	65.52	54.88	36.97	26.27	41.59
47	E19a_E20a	KnownJunction	0	46.61	54.43	87.30	69.03	43.34	20.80	51.95
48	ER20a	ExonRegion	0	68.97	50.48	90.06	82.04	45.62	38.97	50.25
49	E20a_E21a	KnownJunction	0	90.23	51.07	120.83	116.68	83.20	49.23	70.28
50	ER21a	ExonRegion	0	138.51	68.14	144.10	110.22	59.23	53.97	57.13
51	E21a_E22a	KnownJunction	0	97.15	80.68	149.22	115.60	51.82	41.38	53.97
52	ER22a	ExonRegion	0	90.08	60.00	117.35	103.58	55.25	36.31	53.00
53	E22a_E23a	KnownJunction	0	56.75	42.69	87.26	95.09	42.21	33.20	46.98
54	ER23a	ExonRegion	0	78.54	57.57	107.86	93.32	56.81	41.43	54.41
55	E23a_E24a	KnownJunction	0	82.01	43.37	99.57	113.62	53.30	34.46	44.11
56	ER24a	ExonRegion	0	122.59	59.78	157.17	113.65	68.21	55.57	57.04
57	E24a_E25a	KnownJunction	0	147.84	70.07	173.98	100.56	90.16	51.05	50.33
58	ER25a	ExonRegion	0	139.81	67.32	178.54	109.22	77.75	43.96	57.98
59	E25a_E26a	KnownJunction	0	130.77	71.38	148.09	122.78	94.24	52.07	44.54
60	ER26a	ExonRegion	1	174.08	86.31	163.43	133.77	75.10	54.85	48.94
61	E26a_E27a	KnownJunction	0	188.91	100.44	183.08	175.20	79.90	60.78	54.00
62	ER27a	ExonRegion	0	151.34	79.38	168.26	134.69	91.39	52.46	66.54
63	E27a_E28a	KnownJunction	0	123.37	56.12	122.92	96.74	77.20	41.35	41.59
64	ER28a	ExonRegion	0	106.65	57.64	121.93	98.10	62.08	47.88	48.71
65	E28a_E29a	KnownJunction	0	72.12	51.20	93.45	82.19	54.66	39.32	43.50
66	ER29a	ExonRegion	0	88.94	61.39	122.64	97.12	53.22	41.31	63.55
67	E29a_E30a	KnownJunction	0	66.23	48.02	104.56	80.19	51.32	38.19	60.74
68	ER30a	ExonRegion	0	104.03	86.75	142.25	139.02	76.90	57.11	68.89
69	E30a_E31a	KnownJunction	0	156.64	77.40	184.39	134.26	104.89	63.89	79.48
70	ER31a	ExonRegion	0	167.33	76.97	185.65	120.90	100.37	51.70	65.74
71	E31a_E32a	KnownJunction	0	111.19	52.15	129.49	102.35	75.15	40.66	48.90
72	ER32a	ExonRegion	0	82.10	84.69	125.37	135.68	64.76	71.22	71.71
73	E32a_E33a	KnownJunction	0	77.11	98.07	87.01	140.39	53.99	54.67	53.70
74	ER33a	ExonRegion	0	80.57	98.46	111.41	157.98	72.73	66.23	67.44
75	E33a_E34a	KnownJunction	0	84.28	111.52	118.94	158.62	55.83	87.45	67.77
76	ER34a	ExonRegion	0	89.63	85.48	103.47	126.54	79.10	63.73	64.28
77	E34a_E35a	KnownJunction	0	124.44	83.96	115.06	110.53	49.36	58.18	57.18
78	ER35a	ExonRegion	0	119.97	86.28	135.74	132.02	88.41	61.25	69.62
79	E35a_E36a	KnownJunction	0	122.64	74.93	156.68	129.03	83.29	59.58	67.29
80	ER36a	ExonRegion	0	108.11	74.59	138.75	124.03	78.10	63.42	67.32
81	E36a_E37a	KnownJunction	0	115.26	73.30	137.14	115.71	110.58	47.94	69.59
82	E36a_E38a	NovelJunction	0	4.76	7.88	6.05	13.33	0.00	2.95	3.81
83	ER37a	ExonRegion	0	120.91	62.67	140.84	113.39	78.46	60.64	67.12
84	E37a_E38a	KnownJunction	0	158.99	72.51	172.54	91.97	75.11	77.37	64.06
85	ER38a	ExonRegion	0	97.10	53.17	120.81	92.88	73.63	54.18	46.75
86	E38a_E39a	KnownJunction	0	64.02	42.24	88.89	52.50	59.06	41.03	33.16
87	ER39a	ExonRegion	0	82.43	66.26	112.79	81.31	58.55	48.99	41.58
88	E39a_E40a	KnownJunction	0	80.30	75.40	122.35	118.14	69.37	55.98	49.20
89	ER40a	ExonRegion	0	108.25	55.42	126.72	94.82	91.39	65.15	60.03