Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	VPS35	Gene	0	263.93	170.45	360.65	222.46	310.53	134.79	345.26
2	299138	Transcript	0	282.04	185.18	395.96	243.46	359.71	133.22	367.26
3	ER1a	ExonRegion	0	50.74	16.69	60.61	34.49	67.29	14.00	49.52
4	E1a_E2a	KnownJunction	0	217.90	71.35	265.45	131.45	350.66	61.56	214.28
5	ER2a	ExonRegion	0	122.62	101.31	178.60	144.02	233.23	87.31	246.81
6	E2a_E3a	KnownJunction	0	46.00	131.44	81.09	135.59	40.99	111.51	121.40
7	ER3a	ExonRegion	0	200.13	182.33	287.04	228.76	164.18	126.23	320.26
8	E3a_E4a	KnownJunction	0	235.48	169.42	355.26	212.01	470.46	123.90	370.07
9	ER4a	ExonRegion	0	220.55	224.43	336.93	247.45	428.52	161.16	370.63
10	E4a_E5a	KnownJunction	0	211.04	272.59	373.66	318.27	292.06	168.38	393.93
11	ER5a	ExonRegion	0	363.34	292.27	496.47	338.48	396.52	207.84	468.43
12	E5a_E6a	KnownJunction	0	307.66	264.58	457.72	304.77	428.32	208.45	374.31
13	ER6a	ExonRegion	0	321.76	256.69	465.62	263.46	408.57	151.53	403.15
14	E6a_E7a	KnownJunction	0	327.59	227.62	470.18	265.79	510.51	108.38	417.96
15	ER7a	ExonRegion	0	375.38	223.53	547.53	258.76	422.11	129.21	423.12
16	E7a_E8a	KnownJunction	0	369.83	223.91	552.78	278.47	364.37	138.02	396.77
17	E8_Aa	NovelBoundary	1	149.14	0.00	217.58	0.00	2.24	0.00	0.00
18	ER8a	ExonRegion	0	348.52	217.26	526.02	265.55	399.56	129.15	436.39
19	E8a_E9a	KnownJunction	0	427.96	207.33	580.13	288.20	502.44	120.79	451.57
20	ER9a	ExonRegion	0	362.55	219.28	541.12	268.44	420.71	134.75	452.69
21	E9a_E10a	KnownJunction	0	273.28	211.59	459.33	284.59	367.28	149.09	445.69
22	ER10a	ExonRegion	0	269.68	223.88	495.63	270.75	361.34	148.45	461.53
23	E10a_E11a	KnownJunction	0	283.38	211.38	480.00	298.57	417.83	143.70	424.97
24	ER11a	ExonRegion	0	280.96	215.20	498.45	274.76	445.24	142.06	487.69
25	E11a_E12a	KnownJunction	0	304.26	225.67	445.45	293.42	442.31	133.97	527.57
26	ER12a	ExonRegion	0	299.29	213.65	430.20	271.17	380.87	148.46	458.76
27	E12a_E13a	KnownJunction	0	215.75	140.68	330.04	235.99	358.43	127.30	387.68
28	E12a_E14a	NovelJunction	0	13.05	6.73	8.42	5.01	6.34	15.28	8.57
29	ER13a	ExonRegion	0	200.26	137.81	295.63	187.80	293.67	104.94	336.64
30	E13a_E14a	KnownJunction	0	155.02	149.06	263.70	181.97	218.20	103.18	304.94
31	ER14a	ExonRegion	0	188.00	139.97	289.90	212.30	280.52	102.89	343.37
32	E14a_E15a	KnownJunction	0	292.19	165.17	360.61	231.85	393.44	130.57	361.08
33	ER15a	ExonRegion	0	384.70	179.22	390.18	300.40	412.00	152.09	400.03
34	E15a_E16a	KnownJunction	0	430.52	165.62	404.83	283.83	393.44	163.99	310.75
35	ER16a	ExonRegion	1	618.55	189.05	592.97	324.51	552.97	209.00	373.89
36	E16_Da	NovelBoundary	1	152.11	2.63	183.21	1.57	5.60	0.00	1.66
37	E16a_E17a	KnownJunction	0	420.87	131.96	515.98	250.08	478.97	132.47	344.81
38	ER17a	ExonRegion	0	181.49	108.89	237.51	148.23	173.52	122.03	238.81
39	IG24_AR3	ActiveIntergenicRegion	0	45.57	16.15	62.26	26.40	20.94	25.50	56.04
40	IG24_SR3	SilentIntergenicRegion	0	22.11	11.38	30.13	21.05	12.53	9.94	30.99
41	IG24_AR2	ActiveIntergenicRegion	0	22.09	11.91	41.22	23.29	14.20	17.36	38.57
42	IG24_SR2	SilentIntergenicRegion	0	12.55	3.25	5.59	2.02	2.66	0.70	16.61
43	IG24_AR1	ActiveIntergenicRegion	0	10.58	3.48	7.95	1.50	1.70	1.43	13.36