Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC005632.2	Gene	0	212.85	192.41	171.95	228.06	55.56	126.83	61.63
2	381448	Transcript	0	6.47	1.72	3.96	3.44	2.30	2.43	0.89
3	308347	Transcript	0	90.94	164.08	98.39	212.62	21.98	117.31	41.37
4	ER1a	ExonRegion	0	56.72	231.22	58.10	268.85	21.93	150.38	39.58
5	E1a_E2a	KnownJunction	0	51.24	148.59	85.37	188.26	33.61	217.37	15.41
6	E1a_E4a	NovelJunction	0	5.39	17.42	6.52	39.34	2.35	11.77	1.72
7	I1_AR1	ActiveIntronRegion	0	67.19	37.59	48.68	25.76	8.97	26.19	11.40
8	I1_SR1	SilentIntronRegion	0	52.91	17.71	30.09	13.45	4.91	11.37	5.38
9	I1_AR2	ActiveIntronRegion	0	42.64	22.32	26.44	17.91	4.76	18.73	5.95
10	I1_AR3	ActiveIntronRegion	0	53.31	35.69	34.82	16.77	6.62	15.69	11.47
11	I1_SR3	SilentIntronRegion	1	32.97	48.85	23.36	21.36	4.78	18.07	7.67
12	I1_AR5	ActiveIntronRegion	0	70.95	38.88	47.68	30.38	8.49	27.31	15.15
13	I1_AR6	ActiveIntronRegion	0	91.65	35.67	32.58	15.87	13.33	12.26	13.25
14	I1_SR5	SilentIntronRegion	0	43.48	16.19	16.26	5.63	7.05	4.57	6.06
15	I1_AR7	ActiveIntronRegion	0	44.72	21.29	22.61	14.37	4.47	17.05	6.84
16	I1_SR8	SilentIntronRegion	0	97.91	36.73	49.25	25.23	13.49	26.83	15.42
17	I1_SR9	SilentIntronRegion	0	55.68	32.15	28.64	19.60	5.77	19.37	10.07
18	I1_AR11	ActiveIntronRegion	0	19.63	94.78	10.08	85.99	3.92	56.21	8.07
19	ER2a	ExonRegion	0	109.29	274.84	121.61	310.29	36.31	212.07	61.11
20	E2a_E3a	KnownJunction	0	1.03	0.00	0.50	1.35	1.13	0.00	0.00
21	E2a_E4a	KnownJunction	0	157.49	336.96	172.07	391.52	65.93	222.87	66.51
22	ER3a	ExonRegion	0	24.83	5.74	15.35	12.40	8.06	9.71	3.55
23	E3a_E4a	KnownJunction	0	0.00	1.16	0.00	0.00	0.00	0.00	0.00
24	ER4a	ExonRegion	0	142.67	295.71	153.35	328.93	48.28	182.72	58.73
25	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER5a	ExonRegion	0	109.97	119.34	115.09	143.53	7.07	68.17	33.02
27	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER6a	ExonRegion	0	177.38	53.78	165.28	101.87	49.01	46.66	45.95
29	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E6a_E8a	NovelJunction	0	0.90	6.52	0.00	1.44	25.40	5.71	0.00
31	ER7a	ExonRegion	0	768.20	441.29	544.81	530.59	161.93	258.73	152.95
32	E7a_E8a	KnownJunction	0	1428.29	758.51	1004.50	954.20	345.01	466.74	240.02
33	ER8a	ExonRegion	0	1188.73	787.23	836.22	1013.46	166.50	478.83	258.05
34	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER9a	ExonRegion	0	1012.30	618.83	604.68	773.31	177.96	384.94	179.39
36	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER10a	ExonRegion	0	262.84	289.81	181.80	365.23	65.30	172.33	73.88
38	E10_Da	NovelBoundary	0	215.97	121.09	179.74	204.32	31.95	121.27	53.05
39	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E10b_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER10b	ExonRegion	0	115.34	155.28	123.10	246.33	0.00	129.06	57.59
42	ER11a	ExonRegion	0	26.67	21.78	30.75	38.22	2.93	17.47	12.95
43	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER12a	ExonRegion	0	3.39	0.45	3.71	1.61	9.80	1.17	2.51
45	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER13a	ExonRegion	0	215.74	112.92	197.41	110.71	78.97	82.44	68.94