Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TRIM72	Gene	0	3.10	2.10	1.74	1.75	4.44	4.99	0.60
2	394969	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	322122	Transcript	0	0	0	0	0	0	0	0
4	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	Ix	Intron	0	468.13	159.34	469.62	175.25	220.92	210.26	88.03
6	Ix_AR1	ActiveIntronRegion	0	468.72	159.53	470.20	175.46	221.18	210.52	88.14
7	Ix	Intron	0	327.72	118.09	382.79	173.51	153.17	171.35	60.84
8	Ix_AR1	ActiveIntronRegion	0	328.16	118.25	383.30	173.75	153.38	171.58	60.92
9	Ix	Intron	0	342.84	62.99	318.32	118.47	39.19	121.27	20.47
10	Ix_AR1	ActiveIntronRegion	0	343.91	63.18	319.30	118.83	39.30	121.65	20.54
11	I1	Intron	0	18.87	9.85	20.55	9.71	11.98	12.49	6.54
12	I1_AR1	ActiveIntronRegion	0	39.67	25.16	46.43	19.62	32.37	22.99	16.37
13	I1_SR1	SilentIntronRegion	0	28.17	21.93	28.37	19.74	31.84	21.10	13.91
14	I1_AR2	ActiveIntronRegion	0	31.86	16.68	27.26	17.40	30.68	22.17	14.31
15	I1_AR3	ActiveIntronRegion	0	18.05	7.28	20.98	9.45	8.07	12.95	4.14
16	I1_SR3	SilentIntronRegion	0	7.59	2.31	10.02	3.26	0.74	6.21	1.80
17	I1_AR4	ActiveIntronRegion	0	10.98	4.21	13.91	5.83	1.24	10.88	3.51
18	I1_SR4	SilentIntronRegion	0	16.09	4.46	14.74	6.08	1.12	7.61	2.44
19	I1	Intron	0	7.92	2.36	3.59	3.63	1.52	9.11	0.65
20	I1_AR1	ActiveIntronRegion	0	10.17	3.12	7.43	4.11	7.25	12.11	2.21
21	I1_SR1	SilentIntronRegion	0	7.47	2.30	3.00	3.61	0.49	8.81	0.41
22	I1_AR2	ActiveIntronRegion	0	11.81	0.00	3.10	1.58	6.18	3.08	0.50
23	E2_Aa	NovelBoundary	0	7.58	5.88	0.69	5.47	4.33	16.70	0.00
24	ER2a	ExonRegion	0	3.52	1.54	1.77	3.72	2.41	7.97	1.01
25	E2a_E3a	KnownJunction	0	0.00	2.42	0.00	0.00	2.07	1.66	0.00
26	ER3a	ExonRegion	0	0.48	0.97	0.08	1.02	2.80	3.63	0.23
27	E3_Da	NovelBoundary	0	0.00	0.00	0.00	2.44	0.00	8.95	0.00
28	E3a_E4a	KnownJunction	0	1.79	1.63	0.00	2.28	2.28	0.00	0.66
29	I3	Intron	0	2.96	2.15	0.94	2.33	0.35	9.50	0.06
30	I3_SR1	SilentIntronRegion	0	2.97	2.16	0.94	2.34	0.35	9.52	0.06
31	I3_AR1	ActiveIntronRegion	0	1.77	1.76	0.59	3.90	0.61	8.47	0.00
32	ER4a	ExonRegion	0	2.90	2.89	0.00	3.60	5.61	11.09	0.11
33	E4_Da	NovelBoundary	0	1.62	1.13	0.73	4.85	2.33	8.31	0.00
34	E4a_E5a	KnownJunction	0	3.55	2.76	0.00	0.00	12.66	5.20	0.00
35	ER5a	ExonRegion	0	3.81	4.98	0.72	2.84	6.68	11.08	0.00
36	E5a_E6a	KnownJunction	0	2.32	2.84	0.00	1.60	2.12	1.66	0.00
37	E6a_E7a	KnownJunction	0	1.03	4.81	1.55	3.96	9.11	4.69	0.00
38	ER6a	ExonRegion	0	1.50	6.23	1.12	3.80	7.50	4.74	0.00
39	ER7a	ExonRegion	0	2.17	3.40	0.96	3.23	4.75	3.61	0.00
40	E7_Da	NovelBoundary	0	7.03	1.10	0.72	1.63	0.00	8.87	0.00
41	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	2.90	1.07	0.00
42	I7	Intron	0	3.25	1.60	0.55	2.54	0.17	7.96	0.00
43	I7_SR1	SilentIntronRegion	0	3.25	1.61	0.55	2.55	0.17	7.98	0.00
44	E8_Aa	NovelBoundary	0	4.37	0.00	0.89	4.63	0.00	16.91	0.00
45	ER8a	ExonRegion	0	4.11	1.71	2.92	1.02	4.84	3.21	0.94
46	IG12_SR1	SilentIntergenicRegion	0	9.29	3.64	0.16	1.25	8.39	5.85	0.17
47	IG12_AR1	ActiveIntergenicRegion	0	7.27	3.81	1.20	2.98	9.11	10.40	0.00
48	IG12_SR2	SilentIntergenicRegion	0	3.94	3.95	0.00	0.00	4.45	11.65	0.00
49	IG12_AR2	ActiveIntergenicRegion	0	6.97	1.57	1.94	2.02	2.09	10.66	0.13
50	IG12_SR3	SilentIntergenicRegion	0	12.53	0.84	3.07	4.92	2.72	20.69	0.67
51	IG12_AR3	ActiveIntergenicRegion	0	8.72	1.97	1.37	3.03	1.32	8.44	0.00