Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC009093.10	Gene	0	4.47	4.86	4.45	3.61	4.22	15.45	3.58
2	219758	Transcript	0	2.88	1.98	2.51	1.90	2.33	8.04	1.91
3	ER1a	ExonRegion	0	0.11	0.00	0.00	0.00	0.42	5.40	0.00
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER2a	ExonRegion	0	2.41	0.00	0.17	0.00	0.39	5.74	0.27
6	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER3a	ExonRegion	0	0.86	0.00	0.82	1.12	0.95	1.57	0.37
8	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER4a	ExonRegion	0	2.69	4.60	7.07	8.22	4.30	26.67	8.48
10	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER5a	ExonRegion	0	2.60	12.22	4.44	12.28	3.46	36.50	7.57
12	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER6a	ExonRegion	0	5.39	7.98	16.27	10.20	6.55	32.31	6.90
14	E6a_E7a	KnownJunction	0	4.77	0.00	1.55	0.00	0.00	1.26	0.00
15	ER7a	ExonRegion	0	4.62	0.00	2.08	1.49	0.97	4.03	0.60
16	E7a_E8a	KnownJunction	0	1.94	0.00	0.00	0.00	0.00	2.87	0.00
17	I7	Intron	0	2.74	0.97	4.88	1.88	5.59	3.95	8.95
18	I7_SR1	SilentIntronRegion	0	2.74	0.97	4.89	1.88	5.59	3.95	8.97
19	ER8a	ExonRegion	0	2.61	0.00	2.51	0.14	8.01	3.54	0.93
20	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E9_Aa	NovelBoundary	0	2.60	1.18	7.89	6.15	14.02	23.58	11.19
22	ER9a	ExonRegion	0	4.52	0.00	2.46	0.47	4.31	7.15	0.78
23	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER10a	ExonRegion	0	5.11	0.00	4.54	0.52	11.45	10.73	1.23
25	E10a_E11a	KnownJunction	0	4.02	0.00	1.19	0.00	1.11	3.81	0.00
26	ER11a	ExonRegion	0	9.64	5.50	6.33	3.61	3.75	13.87	1.57
27	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER12a	ExonRegion	0	2.34	2.59	2.43	2.05	4.23	3.08	1.37
29	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER13a	ExonRegion	0	13.71	8.55	8.35	6.56	1.08	19.26	10.13
31	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER14a	ExonRegion	0	17.46	16.97	18.57	13.64	16.61	35.83	21.68
33	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER15a	ExonRegion	0	2.79	0.00	0.34	0.00	3.23	10.87	0.04
35	E15a_E16a	KnownJunction	0	2.82	0.00	0.00	0.00	0.90	11.39	0.00
36	I15_SR2	SilentIntronRegion	0	13.08	12.55	13.12	12.97	3.74	8.18	11.21
37	ER16a	ExonRegion	0	2.97	0.95	0.92	0.54	2.42	12.71	0.26
38	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E17_Aa	NovelBoundary	0	0.00	1.63	0.00	0.00	0.00	14.20	0.00
40	ER17a	ExonRegion	0	1.66	6.06	2.67	1.99	2.63	16.72	0.99