Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AMDHD2	Gene	0	9.76	14.46	2.79	5.48	37.76	11.79	19.17
2	302956	Transcript	0	10.61	5.78	3.33	5.77	12.46	10.04	14.80
3	293971	Transcript	1	3.97	5.70	1.42	0.00	65.95	1.66	22.87
4	ER1a	ExonRegion	0	0.72	4.22	0.04	0.00	4.46	3.18	0.65
5	E1a_E2a	KnownJunction	0	4.07	9.04	0.55	0.00	3.99	13.56	7.35
6	ER2a	ExonRegion	0	7.90	14.68	3.11	1.70	29.01	13.66	11.14
7	E2a_E3a	KnownJunction	0	9.31	20.73	3.48	3.68	74.39	8.74	17.99
8	ER3a	ExonRegion	0	12.36	19.42	3.90	6.79	36.35	15.76	24.92
9	E3_Da	NovelBoundary	0	9.06	2.84	10.20	1.54	6.48	2.52	4.03
10	E3a_E4a	KnownJunction	0	5.37	15.74	4.93	1.68	18.70	13.35	15.82
11	I3	Intron	0	13.42	3.92	7.45	3.68	6.04	3.26	4.02
12	I3_AR1	ActiveIntronRegion	0	8.38	7.29	12.73	7.23	11.42	13.61	8.63
13	I3_AR2	ActiveIntronRegion	1	8.07	5.22	11.45	6.36	11.18	14.71	8.50
14	I3_SR2	SilentIntronRegion	0	8.84	4.86	10.33	6.23	9.92	13.49	8.10
15	I3_AR3	ActiveIntronRegion	0	8.77	5.07	9.88	6.16	8.53	10.96	6.19
16	I3_AR4	ActiveIntronRegion	0	5.67	5.73	9.13	4.33	6.09	8.06	4.98
17	I3_AR7	ActiveIntronRegion	0	13.26	4.86	6.60	7.33	5.87	2.45	2.02
18	I3_AR8	ActiveIntronRegion	0	14.64	3.84	6.49	7.94	4.65	4.39	2.02
19	I3_AR9	ActiveIntronRegion	0	15.16	3.96	8.72	6.23	4.73	4.47	5.55
20	I3_SR3	SilentIntronRegion	0	18.77	5.16	8.96	4.26	7.00	2.11	4.76
21	ER4a	ExonRegion	0	6.92	12.21	3.84	0.86	25.83	10.77	15.16
22	E4a_E5a	KnownJunction	0	8.46	6.33	3.12	0.00	21.97	5.92	15.49
23	ER5a	ExonRegion	0	11.79	15.34	2.53	7.79	38.37	9.34	22.30
24	E5_Da	NovelBoundary	0	3.79	9.43	2.11	5.17	0.00	2.68	1.48
25	E5a_E6a	KnownJunction	0	14.77	21.36	1.95	8.21	26.03	19.40	31.79
26	E6_Aa	NovelBoundary	0	6.04	9.25	6.24	1.35	1.96	5.52	3.18
27	ER6a	ExonRegion	0	14.04	27.34	3.21	9.14	47.68	21.34	32.28
28	E6a_E7a	KnownJunction	0	10.18	16.26	4.66	11.70	56.59	11.77	30.93
29	ER7a	ExonRegion	0	9.87	20.73	2.05	10.23	47.19	16.40	24.10
30	E7a_E8a	KnownJunction	0	13.22	14.24	4.05	7.56	39.54	12.33	26.86
31	ER8a	ExonRegion	0	10.87	17.71	2.26	8.11	57.51	12.90	30.24
32	E8_Da	KnownBoundary	0	12.83	10.72	3.74	4.58	11.71	9.86	18.14
33	E8a_E8b	KnownJunction	1	3.97	5.70	1.42	0.00	65.95	1.66	22.87
34	ER8b	ExonRegion	0	10.61	5.78	3.33	5.77	12.46	10.04	14.80
35	E8_Ab	KnownBoundary	0	6.93	7.78	3.25	7.96	17.24	11.66	9.96
36	ER8c	ExonRegion	0	7.00	19.76	1.27	6.44	57.03	13.07	24.13
37	E8b_E9a	KnownJunction	0	8.13	12.01	2.63	6.18	57.91	17.34	19.98
38	Ix	Intron	0	4.37	1.68	2.92	4.48	8.96	4.03	4.45
39	Ix_AR1	ActiveIntronRegion	0	4.40	1.69	2.94	4.51	9.00	4.06	4.49
40	E9_Aa	NovelBoundary	0	7.48	0.00	2.97	7.15	14.43	3.11	10.16
41	ER9a	ExonRegion	0	15.53	15.98	5.51	2.45	55.10	10.46	30.39
42	E9_Da	NovelBoundary	0	8.41	0.00	0.89	4.33	17.36	1.63	5.12
43	E9a_E10a	KnownJunction	0	8.33	11.43	2.07	4.09	57.42	9.51	26.51
44	Ix	Intron	0	4.55	1.45	2.93	3.96	11.71	2.70	4.31
45	Ix_AR1	ActiveIntronRegion	0	4.57	1.46	2.94	3.98	11.76	2.72	4.33
46	E10_Aa	NovelBoundary	0	4.52	10.69	2.63	4.09	8.74	8.01	3.55
47	ER10a	ExonRegion	0	8.49	7.71	2.88	4.09	40.18	9.19	10.74