Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PDPK1	Gene	0	67.61	58.64	67.44	51.61	54.46	38.29	64.85
2	342085	Transcript	0	0	0	0	0	0	0	0
3	268673	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	354836	Transcript	0	5.28	2.89	5.17	3.12	2.33	0.31	3.04
5	389224	Transcript	0	5.25	1.56	5.17	3.13	2.07	2.16	0.39
6	ER1a	ExonRegion	0	1.26	2.60	0.95	2.76	2.43	1.38	1.88
7	E1_Ab	KnownBoundary	0	5.07	8.35	2.92	6.69	6.80	3.30	8.66
8	ER1b	ExonRegion	0	11.97	20.38	6.96	9.03	10.72	10.80	12.12
9	E1a_E3a	KnownJunction	1	0.00	16.05	0.70	2.87	3.04	0.00	4.50
10	ER2a	ExonRegion	0	10.10	3.44	5.34	3.70	0.69	2.78	1.17
11	E2a_E3a	KnownJunction	0	1.03	1.23	2.03	4.44	2.28	1.26	0.00
12	I2_SR1	SilentIntronRegion	0	39.69	9.76	25.42	8.80	4.33	5.62	10.81
13	I2_AR2	ActiveIntronRegion	0	14.81	4.95	13.21	4.74	3.45	8.71	8.53
14	I2_SR3	SilentIntronRegion	0	9.19	6.41	4.59	5.33	4.37	8.70	3.12
15	Ix_AR1	ActiveIntronRegion	0	18.22	51.41	27.88	69.07	27.15	60.12	27.42
16	Ix_AR3	ActiveIntronRegion	0	16.43	38.37	22.32	27.47	21.76	26.77	16.87
17	E3_Aa	NovelBoundary	0	29.19	91.71	33.60	116.09	44.79	69.89	43.38
18	ER3a	ExonRegion	0	41.11	55.02	34.37	34.62	10.47	30.66	24.17
19	E3_Da	NovelBoundary	0	23.82	21.49	20.89	21.37	10.24	21.95	28.02
20	E3a_E4a	KnownJunction	1	75.52	89.69	83.76	41.34	11.04	44.01	40.17
21	ER4a	ExonRegion	0	39.35	62.41	43.71	38.54	3.28	36.78	27.19
22	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E4a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER5a	ExonRegion	1	38.83	19.76	38.39	16.03	5.86	15.08	14.69
25	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER6a	ExonRegion	0	3.16	0.23	2.91	0.98	2.39	0.00	2.66
27	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER7a	ExonRegion	0	7.10	4.39	9.60	3.19	2.65	1.85	4.59
29	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E7_Db	NovelBoundary	0	21.45	14.00	21.10	17.83	19.53	8.66	12.94
31	E7b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER7b	ExonRegion	0	10.57	5.77	10.33	6.23	4.66	0.61	6.07
33	ER8a	ExonRegion	0	3.91	4.68	3.68	10.78	1.70	4.10	3.58
34	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	ER9a	ExonRegion	0	5.38	2.45	3.00	7.75	0.65	1.23	4.75
36	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER10a	ExonRegion	0	16.94	3.71	20.65	6.09	25.31	2.92	19.59
38	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER11a	ExonRegion	0	45.09	52.76	43.81	37.70	29.27	30.85	55.97
40	E11a_E12a	KnownJunction	0	73.89	86.77	82.60	65.02	59.50	53.20	104.38
41	ER12a	ExonRegion	0	56.37	84.68	61.30	61.80	54.99	47.23	81.69
42	E12a_E13a	KnownJunction	0	55.13	62.18	79.05	48.47	46.89	33.39	84.05
43	ER13a	ExonRegion	0	59.54	68.09	77.79	64.93	52.72	45.76	81.50
44	E13a_E14a	KnownJunction	0	45.11	70.20	62.30	64.86	76.63	48.70	71.90
45	ER14a	ExonRegion	0	57.04	89.03	84.06	68.72	53.35	42.25	86.99
46	E14a_E15a	KnownJunction	0	58.36	72.98	57.61	74.72	55.72	50.44	80.67
47	ER15a	ExonRegion	0	47.89	69.52	59.88	51.31	36.73	31.73	66.81
48	E15_Da	KnownBoundary	0	79.58	76.98	114.63	58.63	72.92	38.08	112.40
49	ER15b	ExonRegion	0	86.60	70.38	85.50	64.18	72.16	47.75	81.68
50	ER15c	ExonRegion	0	4.61	0.00	8.13	1.25	3.24	2.45	0.00