Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZSCAN2	Gene	0	10.79	10.51	5.92	3.53	49.31	18.61	3.92
2	334141	Transcript	0	1.18	4.32	1.42	1.19	12.94	8.30	1.61
3	379358	Transcript	0	1.38	9.78	0.26	3.04	21.70	7.74	0.42
4	327179	Transcript	0	0	0	0	0	0	0	0
5	358472	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	379353	Transcript	0	5.99	0.00	1.03	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	0.77	1.21	0.00	0.00	0.27	0.00	0.22
8	ER1b	ExonRegion	0	10.47	11.09	2.16	2.67	35.82	11.29	2.99
9	E1_Da	NovelBoundary	1	2.65	0.00	0.78	1.68	14.50	11.07	0.00
10	E1a_E2a	KnownJunction	0	2.52	8.49	0.60	2.84	19.64	13.08	1.58
11	E1a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER2a	ExonRegion	0	11.41	18.70	3.16	6.57	28.32	24.01	2.88
13	E2_Ab	KnownBoundary	0	21.45	21.49	6.64	9.86	45.39	25.89	5.09
14	ER2b	ExonRegion	0	13.61	22.45	5.21	7.78	72.62	30.51	6.14
15	E2_Da	KnownBoundary	0	15.56	28.03	8.42	10.97	64.41	34.92	5.62
16	E2a_E2c	KnownJunction	0	5.99	0.00	1.03	0.00	0.00	0.00	0.00
17	ER2c	ExonRegion	0	13.82	18.89	8.06	7.07	63.03	43.31	2.95
18	E2_Ac	KnownBoundary	0	13.45	12.37	4.22	2.71	53.92	43.44	2.32
19	ER2d	ExonRegion	0	18.84	23.27	5.50	3.93	99.83	42.13	5.92
20	E2_Db	NovelBoundary	0	6.38	5.88	0.00	0.00	22.80	3.73	0.00
21	E2b_E3a	KnownJunction	0	0.00	4.15	1.51	0.00	7.56	8.68	1.40
22	E2b_E4a	KnownJunction	0	1.03	12.32	0.00	3.96	17.84	6.73	0.00
23	E2b_E5a	KnownJunction	0	12.70	9.48	0.82	0.00	34.69	22.19	3.07
24	I2	Intron	0	2.43	3.28	0.77	1.27	15.69	1.94	0.58
25	I2_SR1	SilentIntronRegion	0	3.74	2.17	0.36	1.15	18.78	3.11	0.38
26	I2_AR1	ActiveIntronRegion	0	2.82	4.46	0.75	1.28	14.33	1.14	0.66
27	I2_SR2	SilentIntronRegion	0	2.30	2.99	0.86	1.36	16.33	2.38	0.43
28	I2_AR2	ActiveIntronRegion	0	0.31	3.62	0.81	0.85	14.51	0.00	2.11
29	ER3a	ExonRegion	0	2.36	4.49	1.34	2.39	18.33	7.91	1.82
30	I3_AR3	ActiveIntronRegion	0	0.60	0.40	1.35	0.00	11.16	0.00	0.00
31	ER4a	ExonRegion	0	1.72	7.24	0.51	2.12	25.55	8.75	0.84
32	ER5a	ExonRegion	0	11.92	9.68	7.22	3.45	51.78	18.34	4.31