Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CHRNA5	Gene	0	5.72	4.34	44.74	33.09	97.41	3.97	13.11
2	299565	Transcript	0	0.93	1.86	12.80	20.82	28.77	2.17	3.04
3	394802	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	ER1a	ExonRegion	0	0.01	1.75	1.16	11.62	3.54	0.85	1.35
5	E1a_E3a	KnownJunction	0	0.00	0.00	8.88	22.54	22.96	1.61	2.32
6	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER3a	ExonRegion	0	2.78	3.83	28.37	28.30	59.82	4.06	5.45
8	E3_Ab	KnownBoundary	0	5.74	7.17	43.57	28.77	78.31	8.47	7.50
9	ER3b	ExonRegion	0	9.34	6.52	62.48	38.57	166.87	7.53	15.87
10	E3a_E4a	KnownJunction	0	13.02	7.01	74.17	46.92	236.61	8.28	20.38
11	ER4a	ExonRegion	0	12.67	8.10	100.79	64.51	185.56	8.58	26.31
12	E4a_E5a	KnownJunction	0	6.19	9.48	93.51	57.00	145.86	6.22	21.33
13	ER5a	ExonRegion	0	11.30	9.74	87.48	69.72	185.15	6.17	25.01
14	E5a_E6a	KnownJunction	0	10.87	7.86	85.85	54.18	208.26	6.83	23.25
15	ER6a	ExonRegion	0	6.91	6.43	67.03	53.09	148.34	4.95	20.85
16	E6_Da	NovelBoundary	0	3.10	2.18	22.00	13.46	83.80	1.66	5.45
17	E6a_E7a	KnownJunction	0	4.51	5.33	35.01	22.40	35.11	4.64	7.17
18	I6	Intron	0	1.72	0.85	9.15	4.60	23.95	0.32	2.40
19	I6_AR1	ActiveIntronRegion	0	3.29	0.82	19.53	9.90	59.29	0.21	6.05
20	I6_AR2	ActiveIntronRegion	0	2.41	1.90	13.20	1.24	16.43	0.00	3.55
21	I6_SR1	SilentIntronRegion	0	3.70	1.87	18.56	2.63	22.22	0.00	4.19
22	ER7a	ExonRegion	0	5.16	2.38	29.98	16.74	62.18	3.19	8.12