Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	THSD4	Gene	0	101.04	102.88	14.90	26.03	13.39	18.02	151.26
2	355327	Transcript	0	5.85	27.98	0.41	4.68	0.67	2.94	8.45
3	261862	Transcript	0	0	0	0	0	0	0	0
4	357769	Transcript	0	0	0	0	0	0	0	0
5	345002	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	IG49	Intergenic	0	0.54	2.08	0.50	3.53	0.06	10.89	1.10
7	IG49_SR1	SilentIntergenicRegion	0	0.46	1.85	0.50	2.98	0.06	8.78	0.74
8	IG49_AR1	ActiveIntergenicRegion	0	1.09	6.20	0.10	7.19	0.00	32.02	5.75
9	IG49_SR2	SilentIntergenicRegion	0	1.07	2.56	0.61	6.91	0.03	21.32	2.51
10	ER1a	ExonRegion	0	1.61	0.77	0.00	0.05	0.00	0.18	0.74
11	E1a_E2a	KnownJunction	0	0.87	1.00	0.00	0.00	0.00	0.00	0.80
12	ER2a	ExonRegion	0	15.09	82.17	1.23	14.00	2.00	8.63	23.81
13	E2a_E3a	KnownJunction	0	18.49	156.74	2.18	24.17	0.00	20.45	39.41
14	ER2b	ExonRegion	0	19.40	156.59	2.15	24.63	1.88	14.27	41.39
15	ER3a	ExonRegion	0	17.62	145.31	4.02	21.59	1.03	19.25	44.65
16	E3a_E4a	KnownJunction	0	21.10	103.01	2.60	15.09	0.00	13.29	37.48
17	ER4a	ExonRegion	0	17.30	85.69	2.20	15.75	1.05	11.39	28.87
18	E4a_E5a	KnownJunction	0	42.11	184.16	8.18	29.12	2.86	29.37	103.01
19	ER5a	ExonRegion	0	87.21	235.60	11.36	36.26	9.60	23.74	138.96
20	E5a_E6a	KnownJunction	0	96.52	215.37	17.55	37.30	9.87	19.11	152.06
21	ER6a	ExonRegion	0	116.44	241.93	15.57	47.52	13.05	32.47	179.58
22	E6a_E7a	KnownJunction	0	91.09	209.86	15.13	43.24	9.50	21.01	167.38
23	I6_AR8	ActiveIntronRegion	1	18.66	25.77	4.69	14.03	1.69	1.91	13.16
24	ER7a	ExonRegion	0	99.82	188.76	15.55	46.89	17.09	20.53	192.94
25	E7a_E9a	KnownJunction	1	67.43	170.06	9.27	45.54	13.05	11.90	166.72
26	I7_AR2	ActiveIntronRegion	1	36.94	4.86	2.67	0.17	2.36	0.00	4.35
27	I7_SR4	SilentIntronRegion	0	23.06	5.98	1.99	2.80	2.74	0.54	5.41
28	I7_AR5	ActiveIntronRegion	0	21.48	5.98	2.46	0.10	2.01	1.71	4.40
29	ER8a	ExonRegion	0	2.92	2.26	1.21	0.39	0.17	2.81	1.07
30	E8a_E9a	KnownJunction	0	0.00	0.00	2.60	0.00	0.00	1.66	0.00
31	ER9a	ExonRegion	0	73.71	174.04	11.06	37.42	13.64	18.21	182.94
32	E9_Da	NovelBoundary	0	58.63	92.06	11.28	13.09	5.90	18.47	94.69
33	E9a_E19b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E9b_E10a	KnownJunction	0	64.04	160.91	13.54	43.07	20.06	19.54	183.33
35	ER9b	ExonRegion	0	74.46	175.91	14.02	38.28	19.03	21.21	196.58
36	ER10a	ExonRegion	0	75.01	153.42	13.26	39.34	14.20	17.16	185.44
37	E10a_E11a	KnownJunction	1	57.66	122.48	11.74	34.57	9.73	14.98	194.48
38	ER11a	ExonRegion	0	69.81	108.74	10.89	28.64	12.67	17.05	163.52
39	E11a_E12a	KnownJunction	0	50.50	101.62	10.32	27.69	10.03	13.51	121.77
40	ER12a	ExonRegion	0	62.37	124.36	10.66	31.07	12.62	17.68	174.13
41	E12a_E13a	KnownJunction	1	48.73	90.61	9.53	22.46	14.43	14.18	154.49
42	ER13a	ExonRegion	1	56.08	109.47	11.03	28.98	16.68	17.81	186.41
43	E13a_E14a	KnownJunction	1	27.84	88.59	7.56	28.45	8.90	14.04	150.81
44	ER14a	ExonRegion	1	31.22	97.42	7.91	24.88	10.19	14.75	134.70
45	E14a_E15a	KnownJunction	1	28.06	130.33	9.10	32.83	13.99	9.86	146.78
46	ER15a	ExonRegion	1	37.19	121.97	8.88	28.77	14.55	16.30	152.95
47	E15a_E16a	KnownJunction	1	39.46	94.08	8.69	38.77	9.27	11.93	137.19
48	ER16a	ExonRegion	1	41.02	96.80	8.56	31.40	10.88	13.85	154.58
49	E16a_E17a	KnownJunction	0	50.92	97.89	8.79	16.47	8.71	12.92	124.07
50	ER17a	ExonRegion	0	68.48	120.28	14.69	30.27	14.65	14.95	179.82
51	E17a_E18a	KnownJunction	0	72.13	108.90	12.83	19.67	19.27	18.84	181.84
52	ER18a	ExonRegion	0	88.62	138.95	13.01	25.72	16.60	24.83	229.63
53	E18a_E19a	KnownJunction	0	94.26	144.70	11.71	39.61	13.14	15.54	227.37
54	ER19a	ExonRegion	0	111.68	139.53	19.52	32.75	15.32	27.97	234.75
55	E19_Da	KnownBoundary	0	144.60	90.85	20.18	34.92	13.99	23.64	232.07
56	ER19b	ExonRegion	0	136.34	81.58	19.14	21.60	13.97	16.39	139.74
57	E19_Ab	KnownBoundary	0	14.90	57.69	0.60	22.68	0.00	12.01	7.05
58	ER19c	ExonRegion	0	151.40	53.23	18.36	17.31	12.21	10.29	102.01
59	E19_Db	KnownBoundary	0	127.23	42.19	20.68	6.99	21.69	6.91	103.21
60	ER19d	ExonRegion	0	121.87	69.03	16.34	24.84	16.77	16.94	148.70