Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZFYVE19	Gene	0	39.45	24.12	11.53	5.09	23.11	9.94	39.87
2	355341	Transcript	0	5.90	5.36	3.23	2.05	3.15	2.54	9.35
3	336455	Transcript	0	4.22	0.47	1.29	0.51	1.98	0.50	1.77
4	299173	Transcript	1	3.55	22.28	3.05	3.01	9.54	9.43	14.00
5	ER1a	ExonRegion	0	5.06	7.12	3.42	1.64	3.78	1.84	10.25
6	E1_Ab	KnownBoundary	0	6.98	17.50	3.89	1.46	3.85	4.15	13.66
7	ER1b	ExonRegion	0	13.60	12.23	4.71	2.13	8.82	4.84	25.71
8	E1_Da	KnownBoundary	0	72.57	40.67	61.61	31.15	256.26	35.38	87.69
9	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER1c	ExonRegion	0	11.88	8.96	5.58	4.52	5.66	5.78	17.12
11	E1_Ac	KnownBoundary	0	12.12	5.99	5.60	5.50	6.57	1.34	15.92
12	ER1d	ExonRegion	0	18.38	14.67	5.03	3.75	13.71	4.58	19.49
13	E1_Db	NovelBoundary	0	8.61	11.77	0.65	2.63	5.33	7.66	6.75
14	E1b_E3a	KnownJunction	1	20.48	19.52	2.77	0.00	10.93	5.52	28.30
15	I1	Intron	0	17.18	8.88	5.46	0.54	4.39	5.18	4.66
16	I1_AR1	ActiveIntronRegion	0	17.37	8.96	5.52	0.54	4.43	5.24	4.71
17	E2_Aa	NovelBoundary	0	25.47	7.88	3.84	0.00	5.09	0.00	10.36
18	ER2a	ExonRegion	1	12.65	1.42	3.86	1.53	5.94	1.49	5.30
19	E2_Da	NovelBoundary	1	31.21	12.90	7.16	1.11	5.00	3.99	10.36
20	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	I2	Intron	0	28.32	11.17	14.60	1.41	7.43	4.14	9.66
22	I2_AR1	ActiveIntronRegion	0	28.43	11.22	14.65	1.42	7.47	4.16	9.70
23	E3_Aa	NovelBoundary	1	37.60	6.83	10.42	2.60	3.32	4.50	10.63
24	ER3a	ExonRegion	0	52.30	38.98	14.81	8.04	30.73	12.44	74.64
25	E3a_E4a	KnownJunction	0	63.12	38.65	12.78	6.61	47.77	6.83	66.04
26	ER4a	ExonRegion	0	71.75	39.16	18.73	7.92	59.09	14.45	64.62
27	E4a_E5a	KnownJunction	0	72.62	37.70	19.23	9.16	65.56	18.97	59.40
28	ER5a	ExonRegion	0	124.46	47.90	24.62	8.92	50.73	16.24	96.95
29	E5a_E6a	KnownJunction	1	78.36	65.44	15.59	3.03	36.38	12.14	77.95
30	ER6a	ExonRegion	0	108.53	51.69	26.42	8.51	52.09	20.96	86.47
31	E6a_E7a	KnownJunction	0	95.52	42.01	20.49	8.48	68.63	10.61	82.09
32	ER7a	ExonRegion	0	57.11	39.88	17.66	7.81	42.00	15.00	55.34
33	E7a_E8a	KnownJunction	1	42.93	16.26	12.65	4.01	18.90	2.09	36.13
34	E7a_E9a	KnownJunction	0	3.55	22.28	3.05	3.01	9.54	9.43	14.00
35	E8_Aa	NovelBoundary	1	18.68	1.00	6.51	3.25	0.00	1.66	0.76
36	ER8a	ExonRegion	0	44.35	17.91	12.56	1.86	26.95	5.13	39.73
37	E8a_E9a	KnownJunction	0	49.97	17.18	14.14	1.52	30.36	4.13	34.11
38	ER9a	ExonRegion	0	49.70	39.88	16.92	4.16	33.50	9.93	51.93
39	E9a_E10a	KnownJunction	0	45.13	36.99	13.72	2.87	32.57	14.61	50.10
40	ER10a	ExonRegion	0	56.20	37.39	17.09	8.30	39.26	14.03	52.77
41	E10a_E11a	KnownJunction	0	53.17	32.08	10.88	6.69	21.90	11.82	37.66
42	ER11a	ExonRegion	0	46.09	31.90	13.39	7.95	32.99	14.30	57.48
43	E11a_E12a	KnownJunction	0	46.77	25.38	8.65	4.17	21.28	15.73	50.53
44	E12_Aa	NovelBoundary	0	16.92	2.86	2.27	1.35	1.13	3.32	13.99
45	ER12a	ExonRegion	0	27.55	23.63	11.06	5.84	15.86	15.20	32.43
46	ER12b	ExonRegion	0	0.77	0.00	0.68	0.00	0.00	0.00	0.67