Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CYFIP1	Gene	0	283.84	200.57	300.81	255.87	223.51	116.57	395.52
2	313077	Transcript	0	272.94	211.35	302.13	271.04	226.27	117.65	413.76
3	ER1a	ExonRegion	0	37.76	13.32	22.09	10.19	27.24	6.87	37.14
4	E1a_E2a	KnownJunction	0	85.49	37.49	79.25	43.97	15.56	28.30	63.42
5	ER2a	ExonRegion	0	46.94	58.69	53.24	64.11	21.08	35.16	67.79
6	E2a_E3a	KnownJunction	0	105.88	83.81	94.50	81.95	43.45	54.54	140.65
7	ER3a	ExonRegion	0	209.84	151.83	203.11	140.28	124.74	77.96	194.51
8	E3a_E4a	KnownJunction	1	288.37	179.80	251.97	154.88	201.99	91.17	194.23
9	I3_AR1	ActiveIntronRegion	1	70.58	14.77	25.02	7.04	2.66	6.94	5.70
10	ER4a	ExonRegion	0	354.77	177.98	291.42	204.79	210.94	110.76	251.75
11	E4a_E5a	KnownJunction	0	422.62	209.94	349.56	270.86	255.68	159.16	315.66
12	ER5a	ExonRegion	1	635.21	308.09	544.97	370.80	262.73	203.83	405.82
13	E5a_E6a	KnownJunction	0	623.05	310.79	521.14	405.99	321.03	215.23	450.05
14	ER6a	ExonRegion	0	412.24	292.17	415.78	320.49	298.41	158.23	467.13
15	E6a_E7a	KnownJunction	0	296.00	285.60	362.71	318.51	265.22	142.12	446.90
16	ER7a	ExonRegion	0	303.78	317.79	386.26	320.67	287.45	136.87	533.05
17	E7a_E8a	KnownJunction	0	283.03	317.54	407.21	313.47	256.30	157.74	560.20
18	ER8a	ExonRegion	0	330.49	307.21	467.13	356.05	328.36	134.65	579.98
19	E8a_E9a	KnownJunction	0	367.86	302.88	467.54	376.92	322.67	115.08	570.03
20	ER9a	ExonRegion	0	346.04	306.17	477.42	350.78	267.66	122.93	574.52
21	E9a_E10a	KnownJunction	0	351.52	295.29	433.57	353.05	228.20	115.02	549.17
22	ER10a	ExonRegion	0	294.05	260.18	396.16	315.66	243.04	111.83	490.55
23	E10a_E11a	KnownJunction	0	243.37	192.31	311.52	266.44	249.69	84.90	377.17
24	ER11a	ExonRegion	0	229.38	169.24	257.10	206.49	187.57	71.64	349.08
25	E11a_E12a	KnownJunction	0	148.07	140.58	187.65	152.90	120.82	63.65	295.70
26	ER12a	ExonRegion	0	145.93	137.34	164.02	176.88	131.60	59.32	275.63
27	E12a_E13a	KnownJunction	0	172.16	188.16	202.54	189.01	203.79	75.47	319.28
28	ER13a	ExonRegion	0	169.29	184.38	194.13	209.15	148.40	81.67	353.70
29	E13a_E14a	KnownJunction	0	148.81	161.96	182.35	207.57	116.32	74.37	313.87
30	ER14a	ExonRegion	0	186.12	188.74	196.15	195.94	137.99	84.29	335.71
31	E14a_E15a	KnownJunction	0	194.34	184.69	236.36	198.25	166.90	98.14	321.86
32	ER15a	ExonRegion	0	208.04	168.74	246.47	198.62	148.30	93.20	315.81
33	E15a_E16a	KnownJunction	0	166.68	124.74	243.86	191.62	154.64	79.38	296.88
34	ER16a	ExonRegion	0	204.55	205.02	331.73	239.66	170.53	106.89	369.32
35	E16a_E17a	KnownJunction	0	211.53	247.06	333.92	263.60	188.07	116.63	399.99
36	ER17a	ExonRegion	0	245.00	247.80	334.77	295.25	250.16	127.93	499.02
37	E17a_E18a	KnownJunction	0	286.13	231.19	369.88	319.70	303.21	126.84	557.15
38	ER18a	ExonRegion	0	292.87	258.50	395.35	367.39	269.69	155.74	639.67
39	E18_Da	NovelBoundary	1	100.84	2.84	139.82	0.00	0.00	2.68	1.61
40	E18a_E19a	KnownJunction	0	267.87	254.10	375.35	340.56	353.56	159.22	599.90
41	ER19a	ExonRegion	0	321.02	281.45	403.11	390.25	320.53	174.12	660.73
42	E19a_E20a	KnownJunction	0	300.65	294.95	374.09	428.34	270.34	197.01	685.26
43	ER20a	ExonRegion	0	316.00	258.44	375.60	383.14	316.82	157.27	595.33
44	E20a_E21a	KnownJunction	0	351.04	255.70	364.30	409.89	297.84	170.42	597.05
45	ER21a	ExonRegion	0	463.90	312.45	449.31	360.08	405.35	161.62	727.54
46	E21a_E22a	KnownJunction	0	502.57	302.10	521.31	405.34	450.01	181.14	780.52
47	ER22a	ExonRegion	0	499.52	266.76	425.60	344.21	398.19	152.55	644.23
48	E22a_E23a	KnownJunction	0	559.01	276.56	472.76	356.11	342.27	155.79	561.32
49	ER23a	ExonRegion	0	548.83	261.71	440.65	352.96	413.63	158.33	578.52
50	E23a_E24a	KnownJunction	0	365.14	237.78	377.75	363.51	316.72	149.89	604.53
51	ER24a	ExonRegion	0	232.16	194.77	233.42	273.87	219.77	99.15	351.18
52	E24a_E25a	KnownJunction	0	291.84	183.06	261.32	293.56	289.59	103.26	427.89
53	ER25a	ExonRegion	0	247.38	197.23	264.63	278.40	257.48	104.83	467.57
54	E25a_E26a	KnownJunction	0	195.39	192.10	264.26	236.37	244.01	89.35	397.57
55	ER26a	ExonRegion	0	188.45	188.50	207.66	262.65	174.24	102.96	381.99
56	E26a_E27a	KnownJunction	0	159.07	160.41	148.88	259.83	174.00	96.43	309.14
57	ER27a	ExonRegion	0	163.59	186.66	209.37	247.92	150.39	110.78	328.30
58	E27a_E28a	KnownJunction	0	167.97	198.77	254.87	265.76	104.94	140.00	364.46
59	ER28a	ExonRegion	0	142.13	160.48	200.99	236.73	178.83	106.61	312.87
60	E28a_E29a	KnownJunction	0	114.06	107.69	130.09	218.41	127.94	88.17	233.79
61	ER29a	ExonRegion	0	171.30	162.13	194.31	237.53	164.52	119.81	300.63
62	E29a_E30a	KnownJunction	0	194.14	191.52	235.83	294.75	176.65	130.81	321.08
63	ER30a	ExonRegion	0	247.73	210.96	273.21	322.11	259.99	146.53	421.74
64	E30a_E31a	KnownJunction	0	237.23	172.34	241.78	314.34	248.39	121.13	374.59
65	ER31a	ExonRegion	0	354.03	136.80	316.90	204.93	217.03	121.88	299.44
66	IG41	Intergenic	0	20.12	12.67	21.51	12.88	19.05	6.83	16.07
67	IG41_AR1	ActiveIntergenicRegion	0	23.46	16.74	19.49	16.47	7.63	6.34	11.69
68	IG41_SR2	SilentIntergenicRegion	0	14.60	16.52	27.84	8.98	5.75	2.08	9.11
69	IG41_SR3	SilentIntergenicRegion	0	11.01	17.70	17.64	11.36	5.13	3.79	8.89
70	IG41_AR2	ActiveIntergenicRegion	0	20.42	10.95	23.09	12.04	25.18	7.53	18.82