Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	YLPM1	Gene	0	91.32	77.41	116.75	111.91	163.96	82.98	84.91
2	238571	Transcript	0	7.46	2.29	7.89	1.18	4.22	0.18	2.48
3	325680	Transcript	0	127.11	79.13	152.14	116.45	274.06	103.92	96.47
4	IG14_AR1	ActiveIntergenicRegion	0	4.30	1.18	8.81	3.23	8.57	2.39	3.81
5	ER1a	ExonRegion	0	35.27	80.41	44.43	92.11	42.31	71.34	41.07
6	E1a_E2a	KnownJunction	0	105.48	90.82	155.77	162.52	139.12	98.62	108.32
7	ER2a	ExonRegion	0	159.80	123.42	201.99	212.01	200.73	133.29	143.83
8	E2a_E3a	KnownJunction	0	136.16	141.68	168.28	208.71	130.85	121.51	147.73
9	ER3a	ExonRegion	0	128.76	137.89	169.23	209.09	203.29	123.29	144.75
10	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	I3	Intron	1	55.16	50.77	72.94	67.91	88.63	41.77	54.36
12	I3_AR1	ActiveIntronRegion	1	145.78	135.66	192.49	181.68	237.60	112.08	145.79
13	E4_Aa	NovelBoundary	0	44.13	105.09	56.36	145.15	100.05	72.49	71.10
14	ER4a	ExonRegion	0	66.40	88.22	93.56	130.20	133.63	71.01	87.79
15	E4a_E5a	KnownJunction	0	131.37	73.45	169.86	116.41	133.29	99.96	122.58
16	E4a_E6a	NovelJunction	1	12.03	9.64	28.53	2.95	18.35	1.66	8.31
17	ER5a	ExonRegion	0	108.28	91.77	146.10	133.13	189.88	85.05	112.78
18	E5a_E6a	KnownJunction	0	193.95	107.79	278.50	220.77	465.00	149.49	167.06
19	ER6a	ExonRegion	0	183.90	115.62	240.70	231.41	314.06	164.16	167.83
20	E6a_E7a	KnownJunction	0	107.33	98.78	161.65	186.25	186.87	135.04	121.44
21	ER7a	ExonRegion	0	119.70	102.14	162.93	154.17	255.65	135.33	125.05
22	E7a_E8a	KnownJunction	0	125.61	78.32	167.57	135.10	173.82	99.24	111.43
23	ER8a	ExonRegion	0	125.96	100.70	152.62	148.83	291.51	109.44	116.49
24	E8a_E9a	KnownJunction	0	95.43	106.06	120.90	153.15	225.04	125.82	95.39
25	ER9a	ExonRegion	0	151.96	110.30	157.07	153.34	290.59	123.16	106.86
26	E9a_E10a	KnownJunction	0	139.19	108.97	159.47	157.81	273.11	120.17	103.13
27	ER10a	ExonRegion	0	171.89	101.42	172.47	152.57	265.77	114.71	112.55
28	E10a_E11a	KnownJunction	0	100.31	80.92	123.11	111.75	221.86	88.20	95.30
29	ER11a	ExonRegion	0	86.23	63.40	116.65	103.06	212.59	63.30	80.22
30	E11a_E12a	KnownJunction	0	92.46	47.53	121.16	87.91	234.63	39.53	70.65
31	ER12a	ExonRegion	0	130.79	47.96	168.56	95.52	229.56	73.17	79.41
32	E12a_E13a	KnownJunction	0	144.20	56.30	186.83	105.93	234.12	97.55	73.81
33	E12a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER13a	ExonRegion	1	200.97	81.06	222.82	120.02	296.75	100.87	86.22
35	E13a_E14a	KnownJunction	1	319.41	123.29	295.09	191.91	420.07	148.58	122.03
36	ER14a	ExonRegion	1	260.57	109.82	281.31	165.20	404.11	127.68	117.82
37	E14a_E15a	KnownJunction	1	276.65	112.60	283.28	194.49	406.74	158.39	113.91
38	ER15a	ExonRegion	0	196.67	108.17	248.92	173.52	392.14	159.41	121.05
39	E15a_E16a	KnownJunction	0	151.53	80.68	207.59	181.92	408.29	152.60	123.94
40	ER16a	ExonRegion	0	186.23	102.83	230.72	182.95	433.42	162.27	146.60
41	E16a_E17a	KnownJunction	0	176.50	119.46	214.23	166.66	350.75	145.87	113.26
42	ER17a	ExonRegion	0	158.17	105.48	199.82	167.32	266.14	131.76	131.05
43	E17_Da	KnownBoundary	1	31.14	10.85	33.04	4.09	16.23	2.17	8.36
44	E17a_E18a	KnownJunction	0	94.28	81.52	129.12	124.62	266.35	79.49	121.20
45	E17a_E19a	NovelJunction	1	14.95	10.56	12.55	34.57	10.42	41.11	0.00
46	ER17b	ExonRegion	0	14.92	4.57	15.77	2.36	8.43	0.37	4.97
47	I17	Intron	0	22.38	7.08	18.43	4.16	10.14	2.81	6.76
48	I17_SR1	SilentIntronRegion	0	24.15	7.55	21.81	7.12	14.95	5.02	8.73
49	I17_SR2	SilentIntronRegion	0	24.98	7.41	20.63	3.22	8.47	1.91	7.01
50	I17_AR2	ActiveIntronRegion	0	22.53	7.07	18.74	4.26	14.48	2.71	6.89
51	E18_Aa	NovelBoundary	1	31.03	15.95	11.75	6.56	15.98	8.12	5.89
52	ER18a	ExonRegion	0	98.92	86.30	137.57	125.01	297.01	89.00	133.01
53	E18a_E19a	KnownJunction	0	74.90	68.25	110.65	101.54	345.54	82.49	110.24
54	I18	Intron	0	22.03	6.76	20.03	3.96	7.54	4.99	6.45
55	I18_SR1	SilentIntronRegion	0	24.24	4.83	17.73	2.83	5.77	2.68	5.20
56	I18_AR2	ActiveIntronRegion	0	22.98	7.38	22.03	4.27	8.33	5.28	6.90
57	I18_SR2	SilentIntronRegion	0	19.73	10.50	15.66	5.27	9.52	11.99	8.12
58	ER19a	ExonRegion	0	115.21	94.69	140.93	113.53	314.50	132.64	113.76
59	E19a_E20a	KnownJunction	0	111.31	85.91	143.39	140.77	285.09	146.51	101.87
60	ER20a	ExonRegion	0	123.95	88.18	162.25	124.96	287.86	141.32	98.03
61	E20a_E21a	KnownJunction	0	97.12	89.72	120.37	113.73	235.16	99.59	80.77
62	ER21a	ExonRegion	0	17.94	15.21	24.57	18.94	32.17	25.11	20.23
63	IG15_AR8	ActiveIntergenicRegion	0	6.32	0.80	2.68	1.91	8.91	1.87	7.75
64	IG15_SR5	SilentIntergenicRegion	0	4.49	1.19	3.24	1.08	5.46	2.03	8.67
65	IG15_AR12	ActiveIntergenicRegion	0	2.82	1.16	2.11	0.00	1.76	0.48	8.82
66	IG15_AR15	ActiveIntergenicRegion	0	4.97	2.47	1.09	0.05	2.63	0.98	10.38
67	IG15_AR19	ActiveIntergenicRegion	0	3.09	2.05	0.83	1.51	0.44	1.40	8.40