Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AL161668.6	Gene	0	20.82	60.93	95.91	383.04	104.13	182.91	18.05
2	298694	Transcript	0	21.29	60.38	95.33	293.41	26.86	125.71	19.02
3	298693	Transcript	1	0.77	2.55	3.00	70.00	61.46	93.80	0.00
4	IG20_AR2	ActiveIntergenicRegion	0	0.62	2.70	3.12	30.51	6.59	16.45	1.02
5	ER1a	ExonRegion	0	1.66	4.90	4.19	29.42	5.97	16.74	0.89
6	ER2a	ExonRegion	0	12.07	41.30	51.19	244.39	59.34	101.00	10.03
7	E2a_E3a	KnownJunction	0	14.05	56.25	40.48	321.60	69.11	111.19	7.48
8	ER3a	ExonRegion	0	21.43	55.12	92.48	378.02	82.63	169.62	13.96
9	E3a_E4a	KnownJunction	0	54.24	56.19	167.10	511.40	152.75	213.59	27.04
10	E4_Aa	NovelBoundary	1	16.97	0.00	51.69	1.68	1.18	1.66	0.00
11	ER4a	ExonRegion	0	35.04	74.78	164.47	501.66	131.49	238.03	22.71
12	E4a_E5a	KnownJunction	0	22.11	56.01	103.24	286.62	70.43	71.74	22.87
13	E4a_E6a	NovelJunction	0	0.00	6.02	13.15	63.42	5.62	23.93	1.73
14	ER5a	ExonRegion	0	21.13	52.42	94.78	236.95	137.52	57.99	20.74
15	E5a_E6a	KnownJunction	0	10.45	30.87	77.64	196.17	127.04	54.51	18.26
16	I5	Intron	1	9.86	15.80	42.98	211.90	7.34	167.41	2.14
17	I5_SR1	SilentIntronRegion	1	9.95	15.94	43.35	213.76	7.40	168.89	2.16
18	E6_Aa	NovelBoundary	1	2.59	12.61	18.47	120.50	3.09	81.50	1.75
19	ER6a	ExonRegion	0	20.19	64.75	100.56	360.06	139.38	149.75	25.31
20	E6a_E7a	KnownJunction	0	24.17	85.04	115.22	435.79	142.95	218.66	23.40
21	ER7a	ExonRegion	0	20.60	84.04	110.52	450.94	125.80	203.92	31.21
22	E7a_E8a	KnownJunction	0	22.53	86.49	116.10	465.67	147.45	221.63	32.55
23	E7a_E9a	NovelJunction	0	0.00	6.88	1.77	12.03	0.00	3.56	0.00
24	ER8a	ExonRegion	0	22.51	69.01	129.57	452.51	143.09	175.73	27.34
25	E8a_E9a	KnownJunction	0	22.75	58.53	110.61	403.28	128.54	148.82	27.37
26	ER9a	ExonRegion	0	19.21	68.35	84.69	383.79	137.35	150.86	24.39
27	E9a_E10a	KnownJunction	0	9.10	51.86	70.21	306.05	118.98	109.02	18.00
28	E9a_E11a	NovelJunction	1	1.67	1.21	8.95	53.99	2.07	16.16	2.46
29	ER10a	ExonRegion	0	11.80	55.22	77.50	304.99	109.33	105.14	18.62
30	E10a_E11a	KnownJunction	0	13.05	67.83	74.24	326.83	102.03	104.49	22.87
31	ER11a	ExonRegion	0	15.72	63.04	74.93	420.42	116.20	154.41	22.11
32	E11a_E12a	KnownJunction	0	17.57	71.06	71.43	431.70	97.47	176.66	21.35
33	ER12a	ExonRegion	0	19.02	78.55	92.06	403.12	123.70	177.23	21.67
34	E12a_E13a	KnownJunction	0	22.51	80.60	90.45	405.96	109.13	186.12	18.93
35	E12a_E14a	NovelJunction	1	0.00	1.63	4.51	39.58	0.00	19.75	0.82
36	E13_Aa	NovelBoundary	0	10.82	2.36	37.51	2.57	0.00	4.13	2.58
37	ER13a	ExonRegion	0	16.77	60.34	82.53	334.82	99.99	161.76	14.29
38	E13a_E14a	KnownJunction	0	7.13	62.00	62.68	278.88	80.20	137.13	7.40
39	ER14a	ExonRegion	0	13.43	49.31	60.35	309.75	63.55	150.06	13.15
40	E14a_E15a	KnownJunction	0	27.04	67.41	105.31	480.60	76.01	243.64	15.89
41	ER15a	ExonRegion	0	24.39	69.93	104.38	479.76	108.33	225.93	17.64
42	E15a_E16a	KnownJunction	0	28.37	62.39	121.80	493.74	129.05	187.76	18.46
43	E15a_E18a	NovelJunction	1	0.97	3.13	3.97	37.68	1.18	52.85	0.79
44	ER16a	ExonRegion	0	24.70	59.39	108.25	417.49	117.76	156.67	14.93
45	E16a_E17a	KnownJunction	0	17.62	56.14	66.66	347.09	101.69	107.71	12.12
46	E16a_E18a	NovelJunction	1	1.03	6.75	4.67	71.87	4.06	47.94	0.00
47	ER17a	ExonRegion	0	16.39	61.58	73.29	333.38	85.12	134.05	12.22
48	E17a_E18a	KnownJunction	0	13.29	70.46	111.49	443.62	119.04	192.85	13.37
49	ER18a	ExonRegion	0	23.44	89.62	139.53	620.87	125.79	294.73	24.62
50	E18a_E19a	KnownJunction	0	27.19	94.66	179.40	715.88	159.89	365.58	30.88
51	ER19a	ExonRegion	0	21.98	90.34	134.10	552.85	172.61	278.11	29.56
52	E19a_E20a	KnownJunction	0	16.74	70.22	120.90	469.71	104.57	220.59	26.77
53	E19a_E21a	NovelJunction	0	0.00	3.81	2.43	20.56	0.00	15.87	0.00
54	E19a_E22a	NovelJunction	1	0.00	3.26	0.00	17.66	0.00	45.72	0.00
55	I19_SR1	SilentIntronRegion	0	6.91	6.15	25.44	39.06	20.89	30.17	3.64
56	ER20a	ExonRegion	0	20.08	72.23	120.31	447.29	129.75	227.22	27.84
57	E20a_E21a	KnownJunction	0	27.77	61.19	125.05	304.56	21.39	115.59	21.37
58	E20a_E22a	KnownJunction	1	0.77	2.55	3.00	70.00	61.46	93.80	0.00
59	ER21a	ExonRegion	0	16.06	61.25	78.85	314.39	34.54	127.50	14.35
60	E21a_E22a	KnownJunction	0	20.03	58.72	82.08	261.27	24.64	134.05	21.34
61	I21	Intron	0	3.24	2.01	19.05	37.16	24.55	36.19	3.96
62	I21_AR3	ActiveIntronRegion	1	3.59	2.05	20.54	39.90	26.27	39.55	4.20
63	ER22a	ExonRegion	0	22.98	65.03	104.60	435.29	198.52	272.60	24.33
64	E22a_E23a	KnownJunction	0	18.39	65.57	112.88	429.34	157.15	291.80	21.18
65	ER23a	ExonRegion	0	15.92	58.31	112.71	498.02	149.36	299.27	20.32
66	E23a_E24a	KnownJunction	0	10.51	50.68	79.38	442.40	134.91	238.84	17.77
67	ER24a	ExonRegion	0	27.84	60.04	112.86	371.34	123.84	227.65	20.63
68	IG21	Intergenic	0	5.23	5.29	11.03	32.28	18.73	14.92	3.50
69	IG21_AR1	ActiveIntergenicRegion	0	5.28	5.34	11.14	32.61	18.89	15.05	3.52