Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PABPN1	Gene	0	206.10	225.15	206.89	293.78	376.22	241.11	181.09
2	216727	Transcript	0	222.34	212.30	259.92	324.28	373.91	264.86	185.77
3	397276	Transcript	1	215.03	116.19	117.12	59.77	106.27	37.98	72.91
4	IG33	Intergenic	0	18.62	6.43	15.37	4.25	3.10	2.95	19.88
5	IG33_SR1	SilentIntergenicRegion	0	20.00	10.00	34.03	5.75	4.30	3.50	42.67
6	IG33_AR1	ActiveIntergenicRegion	0	39.57	17.41	44.37	15.38	8.23	7.56	72.07
7	IG33_SR2	SilentIntergenicRegion	0	30.95	11.35	33.85	13.22	7.28	2.24	35.12
8	IG33_SR3	SilentIntergenicRegion	0	7.84	2.25	10.76	5.70	6.13	0.70	9.86
9	IG33_AR2	ActiveIntergenicRegion	0	30.65	11.92	25.43	6.19	6.15	7.03	24.73
10	IG33_AR3	ActiveIntergenicRegion	0	30.05	6.37	16.26	6.23	4.05	2.45	23.00
11	IG33_AR4	ActiveIntergenicRegion	0	26.90	2.00	19.02	6.23	4.05	1.93	24.77
12	IG33_SR4	SilentIntergenicRegion	0	11.19	3.92	8.31	2.34	1.57	1.59	11.19
13	IG33_AR5	ActiveIntergenicRegion	0	20.63	11.29	23.54	9.07	5.25	10.53	39.03
14	IG33_SR5	SilentIntergenicRegion	0	32.40	8.35	19.06	3.38	3.15	4.18	32.79
15	ER1a	ExonRegion	0	14.33	9.21	13.22	4.58	2.34	5.45	27.34
16	E1_Ab	KnownBoundary	0	1.69	2.63	1.81	0.00	0.97	1.55	4.63
17	ER1b	ExonRegion	0	40.08	107.09	48.89	151.91	139.14	140.40	45.97
18	E1a_E2a	KnownJunction	0	204.25	467.29	274.03	660.29	886.38	541.36	269.39
19	E2_Aa	NovelBoundary	1	44.31	44.00	47.28	18.29	43.78	23.02	77.85
20	ER2a	ExonRegion	0	333.97	810.49	460.47	1083.01	1213.69	914.97	517.05
21	E2a_E3a	KnownJunction	0	370.18	938.57	548.65	1292.33	1238.35	985.56	590.38
22	ER3a	ExonRegion	0	447.77	1065.07	679.70	1411.19	1793.94	1147.52	756.41
23	E3a_E4a	KnownJunction	0	584.87	1124.15	828.42	1498.73	2325.64	1357.22	935.41
24	I3_AR1	ActiveIntronRegion	0	68.90	27.33	54.98	25.98	19.44	24.11	18.89
25	E4_Aa	NovelBoundary	1	57.90	33.52	48.92	22.11	13.46	14.28	11.24
26	ER4a	ExonRegion	0	723.06	1151.85	1007.70	1682.07	2295.27	1428.91	1053.29
27	E4a_E5a	KnownJunction	0	659.77	1076.13	954.15	1581.06	1885.56	1317.96	886.73
28	E4a_E6a	NovelJunction	0	3.84	39.20	4.41	40.72	0.95	29.96	6.99
29	ER5a	ExonRegion	0	615.08	1070.05	888.76	1528.05	1723.49	1323.91	943.33
30	E5_Da	NovelBoundary	0	49.84	23.70	55.20	13.25	7.31	14.02	21.73
31	E5a_E6a	KnownJunction	0	665.11	1013.16	874.62	1543.30	1946.49	1284.94	941.22
32	ER6a	ExonRegion	0	655.14	778.44	784.23	1050.87	1551.16	864.22	632.38
33	E6_Da	KnownBoundary	1	55.48	72.51	60.71	28.01	50.07	32.03	55.78
34	E6a_E6b	KnownJunction	0	356.63	383.35	483.59	582.51	635.29	494.05	313.54
35	ER6b	ExonRegion	1	215.03	116.19	117.12	59.77	106.27	37.98	72.91
36	E6_Ab	KnownBoundary	1	133.95	78.18	91.58	30.07	79.26	28.92	33.54
37	ER6c	ExonRegion	1	336.38	255.90	348.47	313.57	385.13	322.03	155.82
38	E6_Db	KnownBoundary	0	2.09	42.64	2.89	68.35	12.36	78.34	0.54
39	ER6d	ExonRegion	0	296.07	244.33	282.94	385.74	484.11	295.09	216.42