Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MPHOSPH8	Gene	0	107.93	82.93	125.37	122.04	146.58	181.86	107.65
2	360754	Transcript	0	4.85	11.64	5.16	15.81	8.92	19.93	11.80
3	361479	Transcript	0	57.95	32.94	93.51	65.26	108.65	101.06	78.28
4	IG47_AR6	ActiveIntergenicRegion	0	0.00	0.00	0.80	3.74	0.00	0.00	8.22
5	IG47_AR8	ActiveIntergenicRegion	0	1.43	1.44	2.44	4.05	16.46	3.97	4.21
6	ER1a	ExonRegion	0	45.50	85.26	51.78	125.04	60.75	158.13	67.98
7	E1a_E2a	KnownJunction	0	79.51	111.92	86.44	167.40	113.74	241.87	89.31
8	ER2a	ExonRegion	0	107.03	144.37	117.84	182.06	130.35	297.30	120.16
9	E2a_E3a	KnownJunction	0	140.70	166.30	164.87	200.09	135.39	404.11	110.52
10	ER3a	ExonRegion	0	124.17	114.26	149.16	141.49	128.27	249.31	112.48
11	E3_Da	NovelBoundary	0	17.82	53.15	14.74	34.95	13.72	61.26	6.29
12	E3a_E4a	KnownJunction	0	67.96	54.36	106.17	62.69	90.60	93.50	80.86
13	I3	Intron	0	16.68	21.20	17.22	18.75	7.72	27.31	4.83
14	I3_AR1	ActiveIntronRegion	0	16.71	21.25	17.26	18.78	7.73	27.37	4.83
15	ER4a	ExonRegion	0	111.19	65.99	169.86	100.08	128.45	147.38	104.78
16	E4a_E5a	KnownJunction	0	139.95	73.88	184.73	123.10	165.80	142.71	128.42
17	ER5a	ExonRegion	0	141.89	88.88	171.23	120.03	191.57	179.32	128.47
18	E5a_E6a	KnownJunction	0	190.45	93.82	169.77	123.89	235.67	158.57	136.74
19	ER6a	ExonRegion	0	225.02	87.87	197.98	161.23	278.25	209.75	148.88
20	E6a_E7a	KnownJunction	0	273.80	92.63	237.04	186.93	342.70	261.99	167.12
21	ER7a	ExonRegion	0	203.41	74.94	173.50	148.84	254.26	195.10	135.12
22	E7a_E8a	KnownJunction	0	107.52	55.72	103.71	92.76	160.31	126.60	89.16
23	ER8a	ExonRegion	0	97.49	65.51	94.76	87.75	162.56	129.03	94.30
24	E8a_E9a	KnownJunction	0	78.44	66.07	91.21	101.65	147.72	130.06	90.13
25	ER9a	ExonRegion	0	65.11	81.35	94.92	104.49	142.44	167.85	106.48
26	E9a_E10a	KnownJunction	0	68.45	71.51	102.27	120.20	164.14	176.40	123.54
27	ER10a	ExonRegion	0	113.09	74.59	145.03	138.53	212.32	179.40	153.17
28	E10a_E11a	KnownJunction	0	131.13	73.48	165.89	130.69	185.60	163.77	146.08
29	E11_Aa	NovelBoundary	0	6.26	15.68	24.29	41.77	20.49	36.90	21.31
30	ER11a	ExonRegion	0	149.71	81.05	187.87	166.19	230.29	190.58	163.64
31	E11_Da	NovelBoundary	0	19.04	27.85	30.22	60.49	37.16	51.08	14.62
32	E11a_E12a	KnownJunction	0	150.94	63.03	155.49	121.75	218.79	144.05	111.10
33	I11	Intron	0	6.32	9.72	9.82	25.55	14.77	24.10	7.54
34	I11_AR1	ActiveIntronRegion	0	6.33	9.74	9.83	25.59	14.79	24.13	7.55
35	E12_Aa	NovelBoundary	0	12.13	15.68	14.95	41.18	19.94	45.64	9.34
36	ER12a	ExonRegion	0	97.63	57.98	134.66	124.14	184.55	167.65	120.12
37	E12_Da	NovelBoundary	0	10.90	20.02	19.95	36.19	10.49	44.35	13.06
38	E12a_E13a	KnownJunction	0	5.81	16.58	6.94	16.85	10.67	23.10	10.96
39	E12a_E14a	KnownJunction	0	57.95	32.94	93.51	65.26	108.65	101.06	78.28
40	E13_Aa	NovelBoundary	0	24.72	27.37	28.40	23.79	10.21	24.15	21.24
41	ER13a	ExonRegion	0	7.31	15.72	7.91	22.09	12.23	27.10	16.18
42	E13a_E14a	KnownJunction	0	1.44	2.63	0.63	8.51	3.85	9.59	8.25
43	ER14a	ExonRegion	0	64.22	49.43	87.80	85.60	125.15	147.24	102.26
44	E14_Da	NovelBoundary	1	2.94	4.12	10.61	34.00	9.34	23.18	7.62
45	E14a_E15a	KnownJunction	0	70.40	51.41	86.68	106.17	137.90	134.51	95.52
46	ER15a	ExonRegion	0	82.90	56.04	93.02	93.62	131.32	123.46	87.43
47	IG48	Intergenic	0	57.22	29.43	70.12	49.59	103.00	85.31	77.37
48	IG48_AR1	ActiveIntergenicRegion	0	57.22	29.43	70.12	49.59	103.00	85.31	77.37