Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CIT	Gene	0	1.90	0.62	0.24	0.13	83.92	0.26	7.84
2	261833	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.89
3	392521	Transcript	0	0	0	0	0	0	0	0
4	392520	Transcript	0	0.00	0.00	0.03	0.00	0.56	0.06	0.86
5	ER1a	ExonRegion	0	0.77	0.00	0.00	0.00	21.97	0.00	1.60
6	E1a_E2a	KnownJunction	0	1.03	0.00	0.00	0.00	50.69	0.00	5.40
7	ER2a	ExonRegion	0	0.30	0.00	0.00	0.00	21.70	0.00	2.90
8	E2a_E3a	KnownJunction	0	0.67	0.00	0.00	0.00	7.10	0.00	0.86
9	ER3a	ExonRegion	0	0.77	0.00	0.00	0.00	40.98	0.00	7.48
10	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	68.24	0.00	9.63
11	ER4a	ExonRegion	0	0.45	0.00	0.20	0.00	36.49	0.00	8.26
12	E4a_E5a	KnownJunction	0	3.10	0.00	0.00	0.00	46.45	0.00	11.05
13	ER5a	ExonRegion	0	2.58	0.00	0.52	0.00	95.14	0.00	8.46
14	E5a_E6a	KnownJunction	0	3.15	0.00	0.73	0.00	116.30	0.00	11.06
15	ER6a	ExonRegion	0	5.64	0.00	0.35	0.00	111.50	0.00	7.91
16	E6a_E7a	KnownJunction	0	4.91	0.00	0.00	0.00	137.23	0.00	10.81
17	ER7a	ExonRegion	0	1.97	0.00	0.00	0.00	96.79	0.00	7.56
18	E7a_E8a	KnownJunction	0	2.95	0.00	0.00	0.00	84.83	0.00	4.44
19	ER8a	ExonRegion	0	2.32	0.00	0.45	0.00	60.76	0.00	8.57
20	E8a_E9a	KnownJunction	0	3.84	0.00	0.68	0.00	55.93	0.00	10.86
21	ER9a	ExonRegion	0	1.43	0.00	0.07	0.00	67.18	0.00	9.01
22	E9a_E10a	KnownJunction	0	1.00	0.00	0.00	0.00	71.23	0.00	6.18
23	ER10a	ExonRegion	0	0.83	0.00	0.00	0.00	54.55	0.00	6.02
24	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	54.06	0.00	2.34
25	ER11a	ExonRegion	0	0.00	0.00	0.45	0.00	49.35	0.00	5.99
26	E11a_E13a	KnownJunction	0	0.00	0.00	0.53	0.00	41.89	0.00	3.73
27	ER12a	ExonRegion	0	0.00	0.00	0.17	0.00	1.00	0.31	0.00
28	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	1.08	0.00	0.00
29	ER13a	ExonRegion	0	0.00	0.00	0.46	0.12	45.29	0.65	6.23
30	E13a_E14a	KnownJunction	0	0.00	0.00	0.89	1.22	50.79	0.00	3.48
31	ER14a	ExonRegion	0	0.32	0.00	0.20	0.64	52.82	0.78	5.30
32	E14a_E15a	KnownJunction	0	1.87	0.00	0.00	0.00	53.39	0.00	5.85
33	ER15a	ExonRegion	0	1.56	0.00	0.90	0.55	57.90	0.00	7.29
34	E15a_E16a	KnownJunction	0	2.82	0.00	0.00	0.00	54.93	0.00	4.41
35	ER16a	ExonRegion	0	2.56	1.14	0.00	0.00	65.93	0.00	5.19
36	E16a_E17a	KnownJunction	0	1.84	1.55	0.00	0.00	66.53	0.00	3.96
37	ER17a	ExonRegion	0	2.18	1.62	0.89	0.00	50.99	0.00	8.82
38	E17a_E18a	KnownJunction	0	1.03	1.63	1.44	0.00	44.72	0.00	9.77
39	ER18a	ExonRegion	0	0.82	0.28	0.89	0.00	39.02	0.30	4.60
40	E18a_E19a	KnownJunction	0	1.67	0.00	0.85	0.00	31.74	1.66	1.56
41	E18a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.89
42	ER19a	ExonRegion	0	1.10	0.00	1.08	0.00	43.20	0.95	3.45
43	E19a_E20a	KnownJunction	0	0.73	0.00	0.00	0.00	44.42	1.34	2.91
44	ER20a	ExonRegion	0	2.07	0.00	0.53	0.00	67.07	0.24	5.28
45	E20a_E21a	KnownJunction	0	1.52	0.00	0.00	0.00	101.25	0.00	10.28
46	ER21a	ExonRegion	0	1.70	0.00	1.32	0.00	86.43	0.22	10.74
47	E21a_E22a	KnownJunction	0	1.65	0.00	0.00	0.00	82.09	1.39	8.31
48	ER22a	ExonRegion	0	2.59	0.00	0.00	0.00	99.10	1.39	12.89
49	E22a_E23a	KnownJunction	0	1.59	0.00	0.00	0.00	102.56	0.99	10.72
50	ER23a	ExonRegion	0	1.69	0.00	0.00	0.00	74.00	0.04	7.09
51	E23a_E24a	KnownJunction	0	1.69	0.00	0.00	0.00	43.73	0.00	6.15
52	ER24a	ExonRegion	0	1.12	0.52	0.00	0.48	43.73	0.00	4.77
53	E24a_E25a	KnownJunction	0	1.84	0.00	0.00	1.49	66.88	0.00	5.13
54	ER25a	ExonRegion	0	0.92	1.21	0.00	0.00	73.25	0.00	6.17
55	E25a_E26a	KnownJunction	0	0.00	1.16	0.00	0.00	72.11	0.00	4.92
56	ER26a	ExonRegion	0	0.31	1.01	0.00	0.48	78.22	0.00	6.40
57	E26a_E27a	KnownJunction	0	0.00	0.00	0.00	0.00	74.58	0.00	8.80
58	ER27a	ExonRegion	0	1.11	1.32	0.53	0.49	82.39	0.00	8.06
59	E27a_E28a	KnownJunction	0	2.69	3.13	0.00	0.00	63.07	0.00	7.85
60	ER28a	ExonRegion	0	1.59	0.82	0.00	0.00	78.90	0.00	7.07
61	E28a_E29a	KnownJunction	0	1.03	0.00	0.00	0.00	94.77	0.00	4.01
62	ER29a	ExonRegion	0	1.51	0.00	0.00	0.00	104.52	0.00	4.65
63	E29a_E30a	KnownJunction	0	1.70	0.00	0.00	0.00	95.37	0.00	8.43
64	ER30a	ExonRegion	0	1.15	0.00	0.52	0.00	86.56	0.00	8.31
65	E30a_E31a	KnownJunction	0	1.52	0.00	0.72	0.00	116.26	0.00	7.04
66	ER31a	ExonRegion	0	1.85	0.84	1.54	0.00	97.80	0.00	10.18
67	E31a_E32a	KnownJunction	0	1.49	0.00	0.00	0.00	44.05	0.00	8.08
68	ER32a	ExonRegion	0	1.37	1.70	0.00	0.00	50.61	0.00	6.82
69	E32a_E33a	KnownJunction	0	1.82	0.00	0.00	0.00	113.07	0.00	10.72
70	ER33a	ExonRegion	0	1.11	0.00	0.02	0.57	76.94	0.00	7.26
71	E33a_E34a	KnownJunction	0	0.90	0.00	0.52	0.00	78.89	0.00	10.92
72	ER34a	ExonRegion	0	0.46	0.00	0.34	0.69	75.29	0.13	10.07
73	E34a_E35a	KnownJunction	0	0.78	0.00	0.00	0.00	85.43	1.23	10.38
74	ER35a	ExonRegion	0	1.46	0.85	0.19	0.00	101.67	0.55	11.51
75	E35a_E36a	KnownJunction	0	1.03	1.50	0.00	0.00	114.50	1.37	12.17
76	ER36a	ExonRegion	0	1.78	0.81	0.83	0.00	100.10	0.75	15.32
77	E36a_E37a	KnownJunction	0	0.78	1.63	0.65	0.00	75.73	0.00	10.15
78	ER37a	ExonRegion	0	1.51	0.82	0.09	0.00	88.55	0.00	11.85
79	E37a_E38a	KnownJunction	0	3.67	1.60	0.00	0.00	144.93	0.00	13.94
80	ER38a	ExonRegion	0	3.24	0.71	0.61	0.00	120.85	0.00	9.65
81	E38a_E39a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.79
82	E38a_E40a	KnownJunction	0	4.56	1.39	0.00	0.00	117.64	0.00	8.99
83	I38	Intron	0	0.44	0.00	0.07	0.00	18.70	0.00	0.00
84	I38_AR3	ActiveIntronRegion	0	0.72	0.00	0.00	0.00	25.31	0.00	0.00
85	E39_Aa	NovelBoundary	0	0.82	0.00	0.00	0.00	40.13	0.00	0.89
86	I38_SR2	SilentIntronRegion	0	0.41	0.00	0.00	0.00	20.34	0.00	0.00
87	ER39a	ExonRegion	0	0.00	0.00	0.00	0.00	0.74	0.00	1.92
88	E39_Da	NovelBoundary	0	1.90	0.00	0.00	0.00	31.79	0.00	0.00
89	E39a_E40a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	1.59
90	ER40a	ExonRegion	0	4.01	0.33	0.53	0.00	142.02	0.00	10.92
91	E40a_E41a	KnownJunction	0	4.26	0.00	0.63	0.00	119.71	0.00	12.73
92	ER41a	ExonRegion	0	2.75	1.36	0.06	0.70	128.59	0.00	13.57
93	E41a_E42a	KnownJunction	0	1.74	0.00	0.00	0.00	122.04	0.00	9.99
94	ER42a	ExonRegion	0	1.71	1.42	0.00	0.68	105.51	0.00	13.09
95	E42a_E43a	KnownJunction	0	2.44	1.05	0.00	0.00	105.03	0.00	11.90
96	ER43a	ExonRegion	0	3.76	1.83	0.00	0.00	132.86	0.13	13.65
97	E43a_E44a	KnownJunction	0	3.67	0.00	0.00	0.00	153.07	1.10	18.32
98	ER44a	ExonRegion	0	6.82	0.00	0.00	0.00	174.76	1.36	13.57
99	E44a_E45a	KnownJunction	0	10.08	0.00	0.00	0.00	169.51	1.39	16.31
100	ER45a	ExonRegion	0	5.41	0.00	0.00	0.00	157.13	1.64	14.80
101	E45a_E46a	KnownJunction	0	7.54	0.00	0.00	0.00	179.54	0.00	15.91
102	ER46a	ExonRegion	0	4.90	0.49	0.00	0.00	152.45	0.00	11.49
103	E46a_E47a	KnownJunction	0	4.47	1.63	0.00	0.00	134.61	0.00	10.33
104	ER47a	ExonRegion	0	3.34	1.55	0.00	0.00	107.52	0.00	11.61
105	E47a_E48a	KnownJunction	0	3.72	2.78	0.00	0.00	72.29	0.00	15.81
106	ER48a	ExonRegion	0	1.63	1.15	0.00	0.00	74.42	1.04	10.21
107	E48a_E49a	KnownJunction	0	0.80	0.00	0.00	0.00	24.87	0.00	6.54
108	ER49a	ExonRegion	0	1.69	0.17	0.00	0.00	45.02	0.00	5.38
109	E49a_E50a	KnownJunction	0	1.42	1.63	0.60	0.00	68.26	0.00	6.43
110	ER50a	ExonRegion	0	2.39	1.11	0.00	0.00	70.82	0.41	7.02
111	E50_Da	KnownBoundary	0	0.70	0.00	0.00	0.00	24.09	0.00	0.00
112	ER50b	ExonRegion	0	2.70	1.29	0.22	0.19	130.86	0.37	8.99