Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 GPR133 Gene 0 0.14 0.03 1.96 3.44 0.96 182.69 0.23 2 261654 Transcript 0 0.25 0.16 2.99 3.71 0.61 207.59 0.22 3 376682 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.75 0.00 4 335486 Transcript 0 0.00 0.00 0.00 0.00 0.00 4.13 0.00 5 ER1a ExonRegion 0 0.27 0.00 3.74 2.58 1.11 220.45 0.38 6 E1a_E2a KnownJunction 0 0.00 0.00 7.06 5.01 1.18 158.41 0.69 7 ER2a ExonRegion 0 0.77 0.76 6.02 5.26 0.59 206.90 0.31 8 E2a_E3a KnownJunction 0 1.03 1.42 1.57 2.93 0.00 178.49 0.00 9 ER3a ExonRegion 0 0.29 0.77 1.78 3.68 0.89 209.84 0.92 10 E3a_E4a KnownJunction 0 0.00 0.00 1.38 0.00 0.95 152.54 0.89 11 I3_AR2 ActiveIntronRegion 0 0.00 0.00 2.05 1.21 0.86 40.11 0.00 12 ER4a ExonRegion 0 0.00 0.00 2.85 4.08 0.74 189.69 0.20 13 E4a_E5a KnownJunction 0 0.00 0.00 4.73 4.12 0.00 161.15 0.00 14 E4a_E7a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 8.82 0.00 15 E4a_E8a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 21.76 0.00 16 ER5a ExonRegion 0 0.00 0.00 3.47 2.58 0.64 180.60 0.26 17 E5a_E6a KnownJunction 0 0.00 0.00 4.40 3.25 0.95 168.11 0.00 18 ER6a ExonRegion 0 0.00 0.00 1.52 5.03 1.36 232.31 0.01 19 E6a_E7a KnownJunction 0 0.00 0.00 0.60 4.77 0.97 224.10 0.00 20 ER7a ExonRegion 0 0.02 0.00 0.68 5.64 1.13 308.86 0.00 21 E7a_E8a KnownJunction 0 0.00 0.00 0.00 5.82 0.00 298.71 0.00 22 ER8a ExonRegion 0 0.48 0.00 2.77 4.48 0.53 272.96 0.33 23 E8a_E9a KnownJunction 0 0.90 0.00 0.82 4.50 0.00 199.31 0.00 24 E8a_E11a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 11.28 0.00 25 E8a_E12a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 16.32 0.00 26 ER9a ExonRegion 0 0.68 0.00 3.70 3.14 0.00 191.13 0.00 27 E9a_E11a KnownJunction 0 0.00 0.00 6.75 0.00 0.00 183.10 0.00 28 E9a_E12a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 21.57 0.00 29 ER10a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.50 0.01 30 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER11a ExonRegion 0 0.00 0.00 3.17 2.80 1.02 182.59 0.86 32 E11a_E12a KnownJunction 0 0.00 0.00 2.11 1.68 0.00 191.70 0.00 33 ER12a ExonRegion 0 0.53 0.00 2.98 2.83 1.12 216.80 0.00 34 E12a_E13a KnownJunction 0 0.00 0.00 2.97 2.98 0.00 200.11 0.00 35 ER13a ExonRegion 0 0.00 0.00 1.16 2.49 0.09 154.23 0.00 36 E13a_E14a KnownJunction 0 0.00 0.00 0.76 1.30 0.90 122.05 0.00 37 ER14a ExonRegion 0 0.41 0.00 2.38 1.58 1.41 169.90 0.00 38 E14a_E16a KnownJunction 0 0.00 0.00 1.74 4.17 2.31 150.86 0.00 39 ER15a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.19 0.00 40 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 1.66 0.00 41 ER16a ExonRegion 0 0.00 0.00 0.63 1.82 1.02 126.05 0.00 42 E16a_E17a KnownJunction 0 0.00 0.00 1.21 1.68 0.00 145.04 0.00 43 ER17a ExonRegion 0 0.00 0.00 0.57 4.62 0.62 150.26 0.00 44 E17a_E18a KnownJunction 0 0.00 0.00 0.00 6.39 0.00 111.38 0.00 45 E17a_E23a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 9.54 0.00 46 ER18a ExonRegion 0 0.00 0.00 1.32 5.12 0.80 115.39 0.00 47 E18a_E19a KnownJunction 0 0.00 0.00 0.00 6.58 0.85 109.88 0.00 48 ER19a ExonRegion 0 0.00 0.00 1.15 5.53 0.55 117.50 0.46 49 E19a_E20a KnownJunction 0 0.00 0.00 1.41 3.98 1.11 89.00 0.00 50 ER20a ExonRegion 0 0.00 0.00 1.17 3.15 1.49 156.61 0.28 51 E20a_E21a KnownJunction 0 0.00 0.00 2.34 5.77 0.00 235.17 1.19 52 ER21a ExonRegion 0 0.00 0.00 1.22 5.68 0.00 227.32 0.12 53 E21a_E22a KnownJunction 0 0.00 0.00 0.70 7.23 0.00 216.11 0.00 54 ER22a ExonRegion 0 0.00 0.00 1.27 7.31 1.46 186.39 0.00 55 E22a_E23a KnownJunction 0 0.00 0.00 1.64 7.26 3.46 170.45 0.00 56 ER23a ExonRegion 0 0.00 0.00 1.55 3.23 2.50 185.15 0.09 57 E23a_E24a KnownJunction 0 0.00 0.00 0.00 1.30 0.00 154.74 0.62 58 ER24a ExonRegion 0 0.00 0.00 1.47 3.54 0.78 212.40 0.44 59 E24a_E25a KnownJunction 0 0.00 0.00 0.00 1.52 3.02 186.26 0.00 60 ER25a ExonRegion 0 0.00 0.00 0.18 4.48 4.03 184.86 1.35 61 E25a_E26a KnownJunction 0 0.00 0.00 0.60 4.63 2.86 154.26 1.59 62 ER26a ExonRegion 0 0.14 0.00 1.92 2.06 2.03 247.48 0.36 63 E26a_E27a KnownJunction 0 0.80 0.00 1.35 0.00 0.00 176.13 0.00 64 ER27a ExonRegion 0 0.37 0.00 0.44 0.78 0.00 74.93 0.00 65 IG7_AR1 ActiveIntergenicRegion 0 0.35 0.17 1.53 3.91 0.66 201.44 0.12