Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 AACS Gene 0 124.65 111.34 35.86 56.45 196.90 73.27 120.00 2 316519 Transcript 0 2.61 1.34 1.76 1.03 5.71 0.77 2.02 3 316543 Transcript 0 4.97 12.32 1.22 8.94 3.18 7.02 3.12 4 261686 Transcript 0 0 0 0 0 0 0 0 5 331699 Transcript 0 92.08 81.97 37.97 36.14 163.61 46.50 82.86 6 IG32_AR1 ActiveIntergenicRegion 0 11.42 0.65 13.66 0.67 38.19 0.22 35.42 7 IG32_SR1 SilentIntergenicRegion 0 9.53 0.42 6.70 0.00 17.00 0.00 27.81 8 IG32_AR2 ActiveIntergenicRegion 0 15.01 0.31 15.39 1.27 61.64 0.94 45.35 9 IG32_AR4 ActiveIntergenicRegion 0 9.50 0.63 13.78 0.70 59.56 0.34 46.86 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.32 0.00 0.31 0.32 11 E1_Ab KnownBoundary 0 0.00 1.31 0.00 2.79 0.00 1.23 1.85 12 ER1b ExonRegion 0 23.21 34.27 4.70 19.55 18.69 23.93 17.12 13 E1a_E2a KnownJunction 0 57.70 88.22 15.46 32.24 61.99 63.94 36.72 14 ER2a ExonRegion 0 112.09 111.24 38.45 55.73 121.61 83.20 81.83 15 E2a_E3a KnownJunction 0 158.39 131.65 44.75 56.86 144.91 119.71 102.08 16 ER3a ExonRegion 0 167.82 148.96 51.89 66.78 217.88 104.15 116.36 17 E3a_E4a KnownJunction 0 187.43 172.00 63.37 60.01 221.93 108.30 137.68 18 ER4a ExonRegion 0 212.66 183.44 67.11 76.78 251.97 109.81 146.24 19 E4a_E5a KnownJunction 0 172.46 166.01 57.70 76.13 308.86 98.25 110.80 20 ER5a ExonRegion 0 191.00 137.92 57.83 73.14 308.61 81.84 139.01 21 E5a_E6a KnownJunction 0 178.37 101.70 58.36 61.23 295.12 76.65 111.53 22 ER6a ExonRegion 0 204.02 119.66 65.71 70.45 315.03 76.01 139.30 23 ER6b ExonRegion 0 177.41 125.21 62.28 70.18 294.99 85.70 134.71 24 E6_Da KnownBoundary 0 71.32 41.51 23.70 34.38 138.82 33.74 51.61 25 E6a_E6c KnownJunction 0 92.08 81.97 37.97 36.14 163.61 46.50 82.86 26 E6_Ac KnownBoundary 0 65.26 62.84 25.09 27.17 65.06 37.17 56.47 27 ER6c ExonRegion 0 168.29 143.35 56.90 74.82 264.28 87.05 138.74 28 ER6d ExonRegion 0 160.37 158.55 56.47 63.72 215.91 102.48 145.42 29 E6b_E7a KnownJunction 0 183.21 147.67 58.72 69.87 206.74 88.49 151.66 30 ER7a ExonRegion 0 166.41 148.23 60.58 67.35 249.41 87.88 157.11 31 E7a_E8a KnownJunction 0 158.17 152.77 52.11 59.98 303.05 102.88 141.98 32 E8_Aa NovelBoundary 1 65.04 7.80 20.31 1.46 0.95 2.84 1.73 33 ER8a ExonRegion 0 120.92 119.85 39.78 52.61 212.44 70.20 146.65 34 E8a_E9a KnownJunction 0 85.64 104.74 21.25 34.89 186.57 71.29 138.40 35 ER9a ExonRegion 0 110.40 122.67 24.92 32.47 218.04 64.57 138.75 36 E9a_E10a KnownJunction 0 101.11 105.01 22.94 31.80 210.26 65.53 143.04 37 E9a_E11a NovelJunction 0 5.71 14.95 1.55 3.06 0.00 11.04 4.27 38 E9a_E15a NovelJunction 0 5.17 15.61 4.90 13.76 12.93 4.50 7.22 39 ER10a ExonRegion 0 93.76 107.27 23.86 27.69 178.58 57.99 131.44 40 E10a_E11a KnownJunction 0 80.43 74.90 17.43 17.50 147.31 37.41 107.31 41 E10a_E15a KnownJunction 0 4.97 12.32 1.22 8.94 3.18 7.02 3.12 42 ER11a ExonRegion 0 86.70 77.00 25.26 22.96 170.63 45.91 126.77 43 E11a_E12a KnownJunction 0 93.51 76.48 33.01 20.51 229.44 47.52 120.86 44 E11a_E13a NovelJunction 0 1.03 8.85 1.45 1.68 3.27 6.00 2.95 45 ER12a ExonRegion 0 86.02 81.54 27.34 20.73 194.13 37.56 113.39 46 E12a_E13a KnownJunction 0 97.82 59.69 27.56 39.88 210.10 42.18 110.54 47 I12_AR1 ActiveIntronRegion 0 25.27 9.60 4.06 6.54 13.98 2.31 13.73 48 ER13a ExonRegion 0 117.25 85.60 29.26 36.70 187.37 39.82 121.66 49 E13a_E14a KnownJunction 0 103.38 68.88 23.34 50.36 183.27 42.56 128.08 50 ER14a ExonRegion 0 115.70 91.88 31.46 45.87 216.47 49.86 129.93 51 E14a_E15a KnownJunction 0 133.34 87.30 31.41 41.99 270.25 43.74 147.58 52 ER15a ExonRegion 0 140.95 112.41 41.37 54.17 220.79 65.14 161.83 53 E15a_E16a KnownJunction 0 120.43 126.84 37.45 48.17 240.16 74.93 161.90 54 ER16a ExonRegion 0 125.02 125.95 36.89 54.44 206.48 81.23 138.04 55 E16a_E17a KnownJunction 0 124.56 86.98 28.71 50.47 188.73 74.61 102.90 56 E16a_E18a KnownJunction 0 6.13 12.51 5.49 5.50 31.44 5.04 18.87 57 ER17a ExonRegion 0 126.65 139.61 37.39 69.31 199.59 70.82 142.13 58 E17a_E18a KnownJunction 0 115.13 106.69 31.61 69.00 204.82 75.01 107.64 59 I17 Intron 0 26.98 15.04 6.19 5.81 5.94 6.95 10.41 60 I17_AR1 ActiveIntronRegion 0 33.45 15.88 8.16 8.80 5.92 9.64 18.16 61 I17_AR2 ActiveIntronRegion 0 27.19 15.20 6.12 5.63 6.19 6.34 10.17 62 ER18a ExonRegion 0 151.46 126.66 40.87 74.19 247.34 92.84 140.15 63 E18_Da KnownBoundary 0 161.83 132.38 38.94 67.70 234.72 86.11 104.76 64 ER18b ExonRegion 0 141.27 118.42 37.80 73.63 226.07 90.92 131.02 65 ER18c ExonRegion 0 5.23 2.67 3.52 1.75 11.42 1.23 3.71 66 IG33_AR5 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 8.20 0.12 0.00