Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	COQ10A	Gene	0	24.51	86.98	35.43	93.15	80.32	78.23	8.64
2	308197	Transcript	0	4.58	35.76	6.78	31.44	20.84	31.37	2.45
3	257927	Transcript	0	1.31	4.80	1.20	12.79	7.44	10.51	0.17
4	IG36_AR4	ActiveIntergenicRegion	0	0.00	0.00	0.43	0.93	12.34	2.16	0.00
5	ER1a	ExonRegion	0	1.56	18.64	1.99	18.99	4.94	18.56	0.99
6	E1a_E3a	KnownJunction	0	7.61	52.88	11.57	43.89	36.75	44.19	3.91
7	ER2a	ExonRegion	0	2.61	7.11	2.40	15.74	9.74	10.24	0.34
8	E2a_E3a	KnownJunction	0	0.00	2.50	0.00	9.83	5.14	10.77	0.00
9	E3_Aa	NovelBoundary	0	2.55	14.76	8.33	28.69	0.95	16.27	0.75
10	ER3a	ExonRegion	0	11.27	93.69	19.83	101.24	59.30	77.84	6.03
11	E3_Da	NovelBoundary	1	11.82	37.80	10.94	50.88	33.63	20.72	9.90
12	E3a_E4a	KnownJunction	0	14.30	115.80	25.51	92.92	118.28	76.49	2.84
13	E3a_E5a	NovelJunction	0	0.00	10.14	2.30	11.00	2.19	14.10	0.00
14	I3	Intron	0	10.21	22.44	10.57	20.10	19.03	12.69	2.47
15	I3_AR1	ActiveIntronRegion	0	13.74	29.53	11.14	28.05	17.66	20.38	3.94
16	I3_SR1	SilentIntronRegion	0	7.33	4.77	3.69	5.92	19.87	3.90	1.08
17	I3_AR2	ActiveIntronRegion	1	7.75	22.34	12.85	17.68	20.27	8.28	1.53
18	E4_Aa	NovelBoundary	0	11.87	15.82	9.04	22.27	21.30	16.83	3.25
19	ER4a	ExonRegion	0	26.03	129.07	45.57	144.85	122.41	113.62	10.62
20	E4_Da	NovelBoundary	0	10.31	23.57	20.88	31.94	26.97	26.96	4.14
21	E4a_E5a	KnownJunction	0	21.85	125.10	43.50	126.35	150.26	103.93	6.29
22	I4	Intron	0	15.97	24.76	17.18	20.82	23.58	16.53	4.18
23	I4_AR1	ActiveIntronRegion	0	16.12	24.97	17.33	20.99	23.79	16.69	4.22
24	E5_Aa	NovelBoundary	0	13.49	31.45	25.21	20.43	25.89	29.21	3.78
25	ER5a	ExonRegion	0	40.99	157.07	68.38	179.75	211.71	141.77	17.48
26	E5a_E6a	KnownJunction	0	57.30	161.91	98.62	186.22	156.21	168.70	30.25
27	E6_Aa	NovelBoundary	0	9.95	8.30	11.50	15.85	5.19	13.67	2.64
28	ER6a	ExonRegion	0	37.23	107.70	50.53	111.06	99.36	97.17	11.97
29	IG37	Intergenic	0	1.77	2.89	4.01	8.13	1.13	10.01	1.95
30	IG37_AR1	ActiveIntergenicRegion	0	1.69	3.00	4.44	8.00	1.05	11.58	1.88
31	IG37_AR2	ActiveIntergenicRegion	0	2.88	4.86	5.00	16.83	1.62	12.26	3.71
32	IG37_SR1	SilentIntergenicRegion	0	1.26	4.82	4.79	14.80	2.93	14.40	2.83
33	IG37_AR3	ActiveIntergenicRegion	0	2.22	2.77	4.52	8.94	1.62	9.06	2.17