Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 LRP1 Gene 0 1.68 2.46 28.99 42.65 219.52 244.26 252.81 2 393833 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.07 3 338962 Transcript 0 0.00 0.00 0.97 0.38 1.51 1.71 0.48 4 243077 Transcript 0 1.87 2.34 32.95 45.97 265.10 255.78 293.09 5 ER1a ExonRegion 0 0.00 0.00 0.00 1.07 0.00 0.88 0.00 6 ER1b ExonRegion 0 0.33 0.35 5.02 8.60 6.55 43.72 17.99 7 E1a_E2a KnownJunction 0 0.00 0.00 7.44 17.88 19.99 121.80 68.70 8 ER2a ExonRegion 0 1.21 2.57 20.11 27.34 41.08 160.65 98.35 9 E2a_E3a KnownJunction 0 3.66 2.84 15.84 15.58 58.07 189.31 119.87 10 ER3a ExonRegion 0 2.31 4.73 19.92 34.32 58.06 191.13 119.18 11 E3a_E4a KnownJunction 0 2.54 3.94 16.83 28.17 50.51 201.45 128.55 12 ER4a ExonRegion 0 2.00 3.82 23.52 26.76 73.78 169.17 143.33 13 E4a_E5a KnownJunction 0 1.62 1.63 26.64 28.77 74.05 161.28 135.45 14 ER5a ExonRegion 0 0.97 3.12 19.90 33.23 63.21 153.59 123.36 15 E5a_E6a KnownJunction 0 0.00 2.99 16.15 30.13 75.77 185.13 117.80 16 ER6a ExonRegion 0 1.24 4.75 19.78 41.97 113.56 164.22 161.64 17 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.56 18 E6a_E8a KnownJunction 0 0.00 0.00 0.83 0.00 0.97 0.00 0.00 19 E6a_E9a KnownJunction 0 2.34 4.10 27.76 38.79 167.85 152.12 175.03 20 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.59 21 ER8a ExonRegion 0 0.00 0.00 1.10 0.76 2.06 3.43 0.95 22 ER9a ExonRegion 0 2.95 7.65 24.22 43.64 145.91 176.30 220.60 23 E9a_E10a KnownJunction 0 3.37 6.52 33.30 43.81 131.47 134.72 184.62 24 ER10a ExonRegion 0 1.41 6.64 36.02 48.72 164.34 170.09 221.51 25 E10a_E11a KnownJunction 0 1.35 5.88 38.87 55.48 160.36 177.33 226.45 26 ER11a ExonRegion 0 1.93 3.79 25.80 41.04 110.03 170.68 167.76 27 E11a_E12a KnownJunction 1 4.06 1.08 29.13 26.77 75.89 145.31 133.07 28 ER12a ExonRegion 0 1.68 0.13 17.17 29.75 61.80 120.34 99.17 29 E12a_E13a KnownJunction 1 2.69 0.00 13.78 50.01 72.73 123.65 102.97 30 ER13a ExonRegion 0 1.41 2.41 20.27 40.85 80.66 162.94 141.23 31 E13a_E14a KnownJunction 0 1.03 5.23 15.79 38.20 70.89 139.25 116.93 32 ER14a ExonRegion 0 1.23 2.93 22.92 32.43 87.27 178.45 155.22 33 E14a_E15a KnownJunction 0 1.60 1.16 17.99 34.27 90.02 186.90 155.27 34 ER15a ExonRegion 0 2.29 0.96 21.77 33.90 100.80 185.28 185.46 35 E15a_E16a KnownJunction 0 3.62 1.23 17.88 43.40 99.40 213.73 200.53 36 ER16a ExonRegion 0 1.41 1.85 21.53 47.73 100.34 185.44 195.13 37 E16a_E17a KnownJunction 0 1.29 2.52 15.39 32.37 108.23 177.79 158.59 38 ER17a ExonRegion 0 0.66 0.50 10.59 34.32 77.19 149.02 113.78 39 E17a_E18a KnownJunction 0 0.93 0.00 20.41 38.01 141.89 171.20 180.50 40 ER18a ExonRegion 0 2.44 1.31 20.13 44.84 114.49 191.70 179.92 41 E18a_E19a KnownJunction 0 1.54 0.00 18.75 52.75 168.56 185.64 197.50 42 ER19a ExonRegion 0 2.88 2.87 26.70 54.24 131.03 166.03 201.40 43 E19a_E20a KnownJunction 0 2.54 3.07 24.93 52.12 173.29 160.40 215.57 44 ER20a ExonRegion 1 3.84 2.60 22.89 50.52 139.10 141.28 185.86 45 E20a_E21a KnownJunction 0 4.24 2.89 29.24 44.10 211.30 161.95 210.56 46 ER21a ExonRegion 0 1.24 1.57 21.63 44.74 112.84 162.03 189.53 47 E21a_E22a KnownJunction 0 1.03 1.39 18.28 47.03 105.86 177.28 166.67 48 ER22a ExonRegion 0 2.62 1.06 20.18 40.96 105.24 141.90 164.32 49 E22a_E23a KnownJunction 0 0.00 1.58 12.16 28.55 84.90 126.74 128.71 50 ER23a ExonRegion 0 0.96 0.70 16.30 29.72 122.80 139.09 179.88 51 E23a_E24a KnownJunction 0 0.00 0.00 20.69 31.48 128.06 166.27 191.28 52 ER24a ExonRegion 0 0.63 1.47 16.42 44.50 142.79 163.65 234.46 53 E24a_E25a KnownJunction 0 0.75 3.15 10.92 33.65 114.50 133.92 173.44 54 ER25a ExonRegion 0 0.90 3.53 17.02 41.29 118.70 167.77 189.93 55 E25a_E26a KnownJunction 0 0.00 1.60 14.97 30.02 89.98 144.05 135.07 56 ER26a ExonRegion 0 0.54 0.65 16.96 27.96 95.03 144.07 135.17 57 E26a_E27a KnownJunction 0 0.75 0.00 25.28 21.08 92.49 141.15 144.45 58 ER27a ExonRegion 0 0.05 0.33 18.95 26.28 90.36 167.70 147.05 59 E27a_E28a KnownJunction 0 0.00 1.44 17.30 14.74 87.42 142.07 143.19 60 ER28a ExonRegion 0 0.00 1.91 15.07 15.05 100.98 152.15 140.23 61 E28a_E29a KnownJunction 0 0.00 2.55 28.25 17.93 134.31 198.85 225.75 62 ER29a ExonRegion 0 0.24 7.49 24.20 27.32 123.02 190.47 218.48 63 E29a_E30a KnownJunction 0 0.00 0.00 9.57 21.10 65.12 121.40 131.59 64 ER30a ExonRegion 0 0.98 4.04 26.66 27.95 144.78 158.01 218.21 65 E30a_E31a KnownJunction 0 0.78 3.21 22.89 19.34 161.85 117.76 207.71 66 ER31a ExonRegion 0 1.25 2.29 22.68 28.78 121.55 149.06 217.08 67 E31a_E32a KnownJunction 0 1.64 3.23 23.90 31.97 154.87 152.65 228.04 68 ER32a ExonRegion 0 1.49 0.82 23.36 32.35 144.45 140.51 215.21 69 E32a_E33a KnownJunction 0 1.77 0.00 16.96 29.75 113.58 155.89 191.45 70 ER33a ExonRegion 0 1.54 1.21 19.54 24.76 140.29 144.54 190.63 71 E33a_E34a KnownJunction 0 0.68 2.31 19.44 24.90 89.47 162.94 199.61 72 ER34a ExonRegion 0 1.40 1.97 18.11 36.20 141.87 132.03 217.39 73 E34a_E35a KnownJunction 0 0.80 1.63 19.60 40.75 98.94 119.71 242.54 74 ER35a ExonRegion 0 0.69 0.36 19.38 43.68 138.06 135.58 229.37 75 E35a_E36a KnownJunction 0 1.03 0.00 16.73 43.70 174.88 154.80 253.11 76 ER36a ExonRegion 0 1.09 0.26 29.09 37.17 163.95 153.20 207.69 77 E36a_E37a KnownJunction 0 3.17 1.55 40.67 34.41 193.97 164.36 232.18 78 ER37a ExonRegion 0 3.96 1.13 42.87 51.43 224.05 181.98 267.48 79 E37a_E38a KnownJunction 0 2.57 0.00 50.83 58.03 243.99 209.44 256.16 80 ER38a ExonRegion 0 4.57 2.14 36.69 53.34 228.83 187.74 263.92 81 E38a_E39a KnownJunction 0 0.97 1.08 31.63 50.88 213.63 174.28 283.78 82 ER39a ExonRegion 0 1.29 2.76 25.47 37.69 186.29 160.07 210.19 83 E39a_E40a KnownJunction 0 3.86 2.86 26.34 36.41 237.26 207.81 272.00 84 ER40a ExonRegion 0 3.64 2.86 35.53 39.41 259.88 212.99 341.09 85 E40a_E41a KnownJunction 0 2.89 5.52 47.67 42.99 265.52 221.98 377.10 86 ER41a ExonRegion 0 3.17 2.28 47.65 46.08 259.79 247.84 394.97 87 E41a_E42a KnownJunction 0 3.07 3.84 48.21 44.13 253.81 281.67 444.80 88 ER42a ExonRegion 0 2.78 2.05 38.50 39.78 252.08 200.37 321.65 89 E42a_E43a KnownJunction 0 2.57 1.63 27.43 27.50 189.13 168.11 218.70 90 ER43a ExonRegion 0 1.62 1.25 28.45 34.65 168.70 187.25 234.16 91 E43a_E44a KnownJunction 0 2.67 2.81 44.50 42.99 214.00 197.11 271.31 92 ER44a ExonRegion 0 1.05 3.96 38.18 37.97 216.30 196.40 290.54 93 E44a_E45a KnownJunction 0 1.03 5.36 41.46 54.86 182.16 178.35 232.53 94 ER45a ExonRegion 0 0.43 3.44 35.77 50.05 212.66 193.16 277.78 95 E45a_E46a KnownJunction 0 0.00 2.68 18.81 57.68 172.71 217.72 262.28 96 ER46a ExonRegion 0 1.37 1.21 27.55 42.15 247.48 187.72 275.24 97 E46a_E47a KnownJunction 0 1.03 2.26 22.86 46.57 336.48 163.96 332.52 98 ER47a ExonRegion 0 1.65 2.18 25.47 41.86 229.66 175.47 314.27 99 E47a_E48a KnownJunction 0 4.09 0.00 21.20 38.52 225.64 133.17 272.07 100 ER48a ExonRegion 0 2.08 1.45 26.50 33.99 261.20 191.20 317.93 101 E48a_E49a KnownJunction 0 1.49 0.00 32.91 32.59 216.84 188.00 236.25 102 ER49a ExonRegion 0 2.52 4.33 27.44 31.06 237.43 187.82 288.82 103 E49a_E50a KnownJunction 0 2.44 1.50 36.59 29.75 289.41 195.21 303.87 104 ER50a ExonRegion 0 4.27 1.04 34.94 33.66 231.86 188.14 277.32 105 E50a_E51a KnownJunction 0 2.40 3.10 27.86 27.52 187.88 168.38 297.08 106 ER51a ExonRegion 0 5.22 0.00 37.25 44.10 264.00 211.87 332.26 107 E51a_E52a KnownJunction 0 3.76 0.00 42.29 40.15 400.31 232.22 348.77 108 ER52a ExonRegion 0 4.01 0.00 36.28 44.43 351.81 266.71 405.81 109 E52a_E53a KnownJunction 0 4.82 0.00 34.63 44.10 422.65 258.51 417.62 110 ER53a ExonRegion 0 1.83 1.09 26.81 46.73 309.19 251.70 380.68 111 E53a_E54a KnownJunction 0 1.97 3.89 28.18 49.09 421.15 303.19 441.95 112 ER54a ExonRegion 0 1.96 3.75 35.20 41.97 333.14 207.00 370.02 113 E54a_E55a KnownJunction 0 1.03 2.89 39.69 63.45 410.18 221.18 342.99 114 ER55a ExonRegion 0 0.21 2.54 31.45 43.12 290.44 196.70 303.93 115 E55a_E56a KnownJunction 0 0.00 0.00 29.53 29.20 287.68 146.97 264.13 116 ER56a ExonRegion 0 0.83 0.62 30.29 43.18 294.30 182.56 303.40 117 E56a_E57a KnownJunction 0 0.00 0.00 27.92 31.10 333.16 149.81 292.83 118 ER57a ExonRegion 0 0.29 1.45 21.43 45.94 262.07 192.16 280.58 119 E57a_E58a KnownJunction 0 0.00 0.00 20.32 38.50 272.28 224.10 279.06 120 ER58a ExonRegion 0 0.70 1.51 23.59 40.70 273.02 195.97 294.72 121 E58a_E59a KnownJunction 0 0.75 0.00 22.19 53.45 274.67 217.91 271.09 122 ER59a ExonRegion 0 1.99 0.89 29.84 49.49 321.75 232.11 322.08 123 E59a_E60a KnownJunction 0 1.82 1.16 34.19 49.85 360.29 230.40 363.85 124 ER60a ExonRegion 0 1.12 3.98 42.62 63.84 353.89 286.91 394.64 125 E60a_E61a KnownJunction 0 1.03 6.23 40.54 59.22 365.11 261.38 366.34 126 ER61a ExonRegion 0 0.64 3.51 37.70 43.25 288.71 248.30 312.00 127 E61a_E62a KnownJunction 0 1.03 3.15 45.27 34.62 382.98 255.96 361.30 128 ER62a ExonRegion 0 3.07 4.23 40.22 51.46 416.02 267.80 453.48 129 E62a_E63a KnownJunction 0 2.60 1.60 53.27 81.35 501.24 365.31 565.62 130 ER63a ExonRegion 0 4.47 1.11 51.65 59.29 437.60 319.15 503.56 131 E63a_E64a KnownJunction 0 3.22 1.08 50.44 47.90 406.49 356.54 432.48 132 ER64a ExonRegion 0 2.67 1.31 45.15 47.58 349.89 287.27 328.75 133 E64a_E65a KnownJunction 0 1.64 0.00 52.94 47.68 406.03 297.16 363.70 134 ER65a ExonRegion 0 1.65 1.78 55.29 51.97 351.69 306.93 374.46 135 E65a_E66a KnownJunction 0 0.75 2.00 45.30 46.54 370.32 285.93 322.92 136 ER66a ExonRegion 0 1.33 1.44 45.81 46.72 347.93 308.27 406.32 137 E66a_E67a KnownJunction 0 2.07 4.10 56.58 51.23 423.18 348.56 453.69 138 ER67a ExonRegion 0 0.81 2.21 43.29 48.50 375.21 309.08 388.94 139 E67a_E68a KnownJunction 0 1.79 1.63 43.01 48.33 432.01 294.88 437.34 140 ER68a ExonRegion 0 1.35 2.13 38.78 50.42 315.72 279.25 360.11 141 E68a_E69a KnownJunction 0 1.85 2.92 29.49 56.73 333.07 270.76 383.88 142 ER69a ExonRegion 0 2.34 2.60 31.47 51.51 334.56 280.14 336.94 143 E69a_E70a KnownJunction 0 0.77 4.44 46.82 53.59 375.18 313.42 396.34 144 ER70a ExonRegion 0 1.50 3.75 33.97 42.92 323.10 291.42 357.00 145 E70a_E71a KnownJunction 0 1.62 1.10 25.03 34.54 306.51 254.76 287.66 146 ER71a ExonRegion 0 1.52 3.34 36.21 37.19 306.71 281.15 321.55 147 E71a_E72a KnownJunction 0 0.82 5.73 47.22 43.89 496.65 287.16 378.18 148 ER72a ExonRegion 0 1.61 2.03 26.96 33.49 275.72 271.09 279.32 149 E72a_E73a KnownJunction 0 1.49 2.60 27.13 32.94 250.10 260.82 294.51 150 ER73a ExonRegion 0 1.01 2.32 32.34 44.95 292.71 291.64 290.67 151 E73a_E74a KnownJunction 0 1.82 4.65 39.89 52.48 355.84 277.32 366.53 152 ER74a ExonRegion 0 1.84 2.71 29.39 55.23 311.70 298.81 357.23 153 E74a_E75a KnownJunction 0 0.00 1.16 23.88 48.98 354.67 267.89 310.10 154 ER75a ExonRegion 0 1.90 3.44 34.75 52.04 379.87 281.91 393.12 155 E75a_E76a KnownJunction 0 4.01 4.49 43.02 49.22 406.97 293.14 404.12 156 ER76a ExonRegion 0 1.90 2.80 26.83 50.84 248.98 252.61 289.47 157 E76a_E77a KnownJunction 0 0.93 2.65 36.08 59.17 407.85 284.64 419.09 158 ER77a ExonRegion 0 4.12 0.63 35.70 67.49 462.16 298.90 379.20 159 E77a_E78a KnownJunction 0 0.72 1.42 48.89 70.00 444.27 334.54 453.62 160 ER78a ExonRegion 0 1.35 3.62 37.48 70.81 363.51 365.30 394.21 161 E78a_E79a KnownJunction 0 0.83 1.13 45.25 39.12 367.46 317.12 302.12 162 ER79a ExonRegion 0 3.22 5.14 38.74 51.82 366.27 348.30 347.93 163 E79a_E80a KnownJunction 0 1.90 7.41 46.89 50.09 345.77 367.34 371.43 164 ER80a ExonRegion 0 4.43 4.09 46.94 68.45 390.54 384.83 367.60 165 E80a_E81a KnownJunction 0 3.44 1.52 38.33 78.29 405.13 369.49 354.93 166 ER81a ExonRegion 0 2.06 1.02 43.38 68.17 466.01 451.14 355.02 167 E81a_E82a KnownJunction 0 0.95 0.00 61.26 69.76 522.82 541.62 445.21 168 ER82a ExonRegion 0 2.22 3.46 60.61 76.80 550.86 569.53 485.26 169 E82a_E83a KnownJunction 0 3.15 4.78 60.87 63.80 528.58 513.30 437.21 170 ER83a ExonRegion 0 1.91 5.32 52.89 56.73 529.73 438.31 416.44 171 E83a_E84a KnownJunction 0 3.54 4.07 37.49 53.97 280.02 313.16 276.55 172 ER84a ExonRegion 0 2.35 3.64 39.76 55.53 375.98 362.49 321.48 173 E84a_E85a KnownJunction 0 1.52 1.39 41.44 64.12 339.31 312.14 294.04 174 ER85a ExonRegion 0 1.25 5.07 33.76 58.91 364.83 388.43 327.44 175 E85a_E86a KnownJunction 0 0.77 5.99 35.08 60.74 261.97 398.73 354.66 176 ER86a ExonRegion 0 1.97 5.11 45.47 68.75 437.07 534.32 416.70 177 E86a_E87a KnownJunction 0 1.94 2.73 53.36 67.40 480.01 618.70 482.01 178 ER87a ExonRegion 0 2.24 2.37 43.40 81.39 384.09 567.77 357.96 179 E87a_E88a KnownJunction 0 2.30 0.00 46.70 64.72 485.88 619.64 402.67 180 ER88a ExonRegion 0 2.23 1.68 61.60 75.62 588.80 687.35 511.52 181 E88a_E89a KnownJunction 0 4.14 3.13 75.98 88.97 696.31 711.29 547.02 182 ER89a ExonRegion 0 3.56 2.44 60.73 76.26 462.86 764.51 457.16 183 E89a_E90a KnownJunction 0 3.17 2.65 54.82 74.50 411.24 750.02 449.71 184 ER90a ExonRegion 0 3.93 3.48 61.72 83.17 516.84 789.99 470.09 185 E90a_E91a KnownJunction 0 6.21 3.70 56.19 80.41 477.49 694.17 436.08 186 ER91a ExonRegion 0 1.31 2.68 30.31 52.05 207.28 536.57 180.22