Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ARID2	Gene	0	70.89	58.30	97.41	96.12	143.42	135.77	29.15
2	338636	Transcript	0	78.84	50.55	58.89	76.18	60.95	81.31	14.32
3	334344	Transcript	0	75.03	78.66	123.30	117.07	129.46	121.11	27.61
4	IG35_SR8	SilentIntergenicRegion	0	8.84	2.15	18.46	4.61	4.51	9.09	0.45
5	IG35_AR9	ActiveIntergenicRegion	0	9.43	1.21	15.76	4.87	4.56	7.36	0.67
6	IG35_SR9	SilentIntergenicRegion	0	7.68	1.21	14.30	5.13	5.31	6.81	0.67
7	IG35_AR10	ActiveIntergenicRegion	0	6.74	1.86	11.27	3.33	3.26	4.11	1.76
8	IG35_SR10	SilentIntergenicRegion	0	10.02	5.75	16.01	5.52	5.53	4.14	2.10
9	IG35_AR11	ActiveIntergenicRegion	0	36.93	48.21	39.15	43.18	38.88	66.05	13.86
10	ER1a	ExonRegion	1	22.84	17.80	19.68	21.90	15.91	24.83	3.67
11	E1a_E2a	KnownJunction	0	31.94	31.34	44.50	37.68	25.80	48.99	8.31
12	ER2a	ExonRegion	1	61.03	40.31	77.16	73.29	66.29	80.76	11.71
13	E2a_E3a	KnownJunction	1	101.68	65.15	110.11	94.22	60.77	107.25	17.10
14	ER3a	ExonRegion	0	84.35	81.42	114.54	109.61	77.80	130.12	22.83
15	E3a_E4a	KnownJunction	0	76.21	92.19	110.28	107.80	70.82	129.79	25.75
16	ER4a	ExonRegion	0	110.37	90.81	134.10	116.68	128.79	162.24	27.29
17	E4a_E5a	KnownJunction	0	125.07	79.71	133.99	119.04	160.22	154.05	28.30
18	ER5a	ExonRegion	0	140.03	103.52	156.47	135.43	145.30	163.09	32.11
19	E5_Da	KnownBoundary	0	164.91	98.20	146.39	154.77	186.68	169.11	27.72
20	E5a_E15b	KnownJunction	0	78.84	50.55	58.89	76.18	60.95	81.31	14.32
21	ER5b	ExonRegion	1	133.00	88.83	152.51	134.58	171.93	152.41	26.33
22	E5b_E6a	KnownJunction	1	103.48	75.79	150.30	118.01	145.33	123.98	20.79
23	ER6a	ExonRegion	0	81.68	74.18	122.83	108.71	127.12	117.98	24.09
24	E6a_E7a	KnownJunction	0	69.81	64.26	96.76	97.09	139.24	110.42	20.68
25	ER7a	ExonRegion	0	89.15	76.14	117.43	110.09	136.85	100.88	23.73
26	E7a_E8a	KnownJunction	1	80.15	72.56	132.31	113.78	105.14	88.98	18.62
27	ER8a	ExonRegion	0	78.71	62.45	123.31	97.27	108.32	95.96	22.90
28	E8a_E9a	KnownJunction	0	59.68	41.88	101.97	59.25	94.40	77.96	20.85
29	ER9a	ExonRegion	0	59.00	60.62	111.15	72.94	97.74	96.27	28.74
30	E9a_E10a	KnownJunction	0	57.93	75.43	119.25	87.64	99.27	87.53	22.03
31	ER10a	ExonRegion	0	60.44	79.96	115.13	103.28	106.39	83.66	24.89
32	E10a_E11a	KnownJunction	0	70.06	89.74	109.78	123.45	106.23	101.49	22.60
33	ER11a	ExonRegion	0	74.85	92.99	129.38	125.68	137.98	110.24	27.81
34	E11a_E12a	KnownJunction	0	65.19	83.99	109.46	121.29	103.12	101.95	17.44
35	E11a_E13a	NovelJunction	0	2.07	8.49	3.95	12.81	0.00	7.34	0.00
36	ER12a	ExonRegion	0	68.92	85.41	118.84	137.76	130.48	124.59	27.64
37	E12a_E13a	KnownJunction	0	73.30	79.76	132.64	138.98	170.59	135.23	29.26
38	ER13a	ExonRegion	0	68.66	76.81	122.11	141.39	125.54	138.74	28.93
39	E13a_E14a	KnownJunction	1	38.60	66.47	107.92	121.56	107.03	144.34	28.61
40	ER14a	ExonRegion	0	68.41	91.69	126.38	132.49	126.07	143.57	37.29
41	E14a_E15a	KnownJunction	0	69.96	101.15	116.24	134.89	151.13	174.09	45.63
42	ER15a	ExonRegion	0	104.67	111.76	173.65	178.30	228.74	232.99	60.92
43	E15_Ab	KnownBoundary	0	104.26	124.34	131.82	234.74	216.33	293.91	78.31
44	ER15b	ExonRegion	0	84.37	71.26	115.23	124.68	185.97	168.30	40.76
45	E15a_E16a	KnownJunction	0	76.92	54.85	106.04	119.82	249.39	175.24	44.23
46	ER16a	ExonRegion	0	60.28	52.76	77.56	106.49	190.16	132.05	31.25
47	E16a_E17a	KnownJunction	0	60.97	58.72	86.90	106.74	183.20	132.20	24.64
48	ER17a	ExonRegion	0	53.20	58.95	86.78	118.08	152.75	155.07	26.88
49	E17a_E18a	KnownJunction	0	57.85	41.04	74.44	115.81	146.82	159.49	25.84
50	ER18a	ExonRegion	0	71.40	62.93	105.06	133.00	176.53	188.49	34.31
51	E18a_E19a	KnownJunction	0	63.09	57.67	87.66	110.72	131.22	165.73	28.76
52	ER19a	ExonRegion	0	82.94	61.02	110.22	111.27	185.45	158.81	25.54
53	E19a_E20a	KnownJunction	0	142.47	74.30	157.20	149.57	224.21	192.69	35.04
54	ER20a	ExonRegion	1	112.69	55.98	132.11	91.73	207.79	157.33	22.61
55	E20_Da	NovelBoundary	0	20.33	2.89	25.05	5.61	14.87	14.50	4.60
56	E20a_E21a	KnownJunction	1	119.20	44.95	127.98	75.94	232.86	143.83	17.26
57	I20	Intron	0	16.63	2.42	16.89	7.31	13.07	7.72	2.54
58	I20_AR1	ActiveIntronRegion	1	31.86	2.48	28.61	8.32	17.86	9.66	1.82
59	I20_AR2	ActiveIntronRegion	0	48.77	6.72	34.09	15.46	26.79	11.99	6.36
60	E21_Aa	NovelBoundary	1	66.01	3.94	70.44	18.91	30.29	35.46	3.04
61	ER21a	ExonRegion	0	46.14	21.74	48.41	40.77	101.22	93.43	14.17