Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	LARP4	Gene	0	143.15	62.10	213.06	112.28	171.77	89.53	94.81
2	398473	Transcript	0	68.75	46.54	70.61	55.94	66.46	37.30	42.42
3	347328	Transcript	0	16.86	19.68	30.39	18.94	37.97	21.82	24.18
4	341915	Transcript	0	2.60	0.81	6.62	2.44	2.01	3.98	2.21
5	293618	Transcript	0	20.69	15.09	26.95	23.14	25.67	9.11	15.17
6	398464	Transcript	0	0.00	0.00	0.18	0.00	0.00	0.00	0.18
7	ER1a	ExonRegion	0	60.87	37.85	75.33	63.61	74.04	29.05	35.33
8	E1a_E4a	KnownJunction	0	76.62	55.22	65.89	48.28	58.88	45.56	49.52
9	E1a_E4b	NovelJunction	1	5.04	8.70	8.26	13.57	11.62	1.66	5.14
10	ER2a	ExonRegion	0	0.00	0.00	0.00	0.62	0.00	0.00	0.00
11	ER3a	ExonRegion	0	0.00	0.00	0.18	0.00	0.00	0.00	0.18
12	E4_Ab	NovelBoundary	1	39.87	0.00	56.32	0.00	2.97	1.34	2.14
13	ER4a	ExonRegion	0	89.91	68.94	88.06	80.43	72.68	49.65	54.14
14	ER4b	ExonRegion	0	206.81	122.91	271.20	188.66	156.37	129.64	118.76
15	E4_Da	NovelBoundary	1	114.69	4.41	94.56	1.14	2.12	0.00	2.42
16	E4a_E5a	KnownJunction	1	11.45	13.24	21.57	19.37	20.61	5.76	11.78
17	E4a_E5b	KnownJunction	0	235.76	100.93	241.87	173.06	197.89	125.61	117.99
18	ER5a	ExonRegion	0	29.93	16.94	32.34	26.91	30.73	12.45	18.57
19	ER5b	ExonRegion	0	233.27	128.87	343.04	221.05	231.01	161.33	125.71
20	E5_Da	KnownBoundary	0	230.57	118.25	382.88	217.19	199.31	151.10	129.64
21	E5a_E8b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER5c	ExonRegion	0	232.14	129.42	403.42	238.54	163.66	162.08	132.28
23	E5b_E6a	KnownJunction	0	229.87	129.81	391.46	250.73	132.81	170.07	129.57
24	ER6a	ExonRegion	0	266.48	170.48	438.91	255.41	185.82	161.04	126.33
25	E6a_E7a	KnownJunction	0	298.95	137.69	448.99	210.36	202.87	124.27	120.68
26	ER7a	ExonRegion	0	249.46	161.12	413.96	208.03	233.58	124.98	135.93
27	E7a_E8a	KnownJunction	0	225.80	147.88	350.65	203.35	220.52	122.93	129.21
28	ER8a	ExonRegion	0	197.73	147.86	343.90	221.63	212.49	136.82	142.14
29	E8_Ab	KnownBoundary	0	169.57	126.79	324.70	224.88	191.27	134.96	131.35
30	ER8b	ExonRegion	0	186.08	143.25	336.72	234.43	177.48	150.53	127.16
31	E8a_E9a	KnownJunction	0	194.47	141.55	336.68	218.57	202.10	154.23	115.53
32	ER9a	ExonRegion	0	243.94	147.51	421.28	223.54	276.61	141.37	158.69
33	E9a_E10a	KnownJunction	0	194.70	110.02	339.94	201.91	220.87	118.45	137.70
34	E10_Aa	NovelBoundary	1	74.69	0.00	123.58	0.00	0.00	0.00	4.23
35	ER10a	ExonRegion	0	191.40	111.77	330.29	184.94	227.49	112.68	141.74
36	E10a_E11a	KnownJunction	0	153.56	81.18	277.55	127.52	226.63	77.34	96.81
37	E10a_E12a	KnownJunction	0	16.86	19.68	30.39	18.94	37.97	21.82	24.18
38	E10a_E13a	NovelJunction	0	10.40	4.44	4.70	12.92	0.00	9.86	0.89
39	I10_AR4	ActiveIntronRegion	0	32.80	7.34	22.95	2.72	22.28	3.41	9.60
40	ER11a	ExonRegion	0	209.23	99.65	312.00	169.48	208.84	96.95	118.96
41	E11a_E12a	KnownJunction	0	197.38	86.12	244.81	154.72	225.66	89.27	96.59
42	ER12a	ExonRegion	0	249.36	99.57	307.08	195.90	256.31	111.54	119.53
43	E12a_E13a	KnownJunction	0	275.18	107.13	310.54	195.22	236.04	102.24	104.15
44	E13_Aa	NovelBoundary	1	42.94	12.11	23.90	4.39	31.72	12.09	8.87
45	ER13a	ExonRegion	0	269.70	104.58	315.50	211.76	262.47	120.41	138.18
46	E13a_E14a	KnownJunction	0	174.06	70.41	253.12	164.17	255.45	108.75	115.63
47	ER14a	ExonRegion	0	229.42	108.84	323.57	217.76	307.88	148.75	163.72
48	E14a_E15a	KnownJunction	0	283.61	127.47	352.65	236.53	368.43	172.51	174.17
49	E14a_E16a	NovelJunction	0	9.18	7.30	12.42	11.13	9.22	8.36	7.61
50	ER15a	ExonRegion	0	349.46	132.30	439.94	256.45	338.18	199.92	175.75
51	E15a_E16a	KnownJunction	0	360.35	114.15	402.20	194.41	392.31	146.25	185.18
52	E15a_E17a	NovelJunction	0	9.21	7.57	26.86	23.22	7.91	22.16	4.86
53	ER16a	ExonRegion	0	308.00	120.08	406.20	207.72	438.67	157.43	189.20
54	E16a_E17a	KnownJunction	0	281.98	136.45	452.55	219.38	276.10	196.36	201.89
55	ER17a	ExonRegion	0	223.48	146.50	378.84	240.32	234.03	195.75	198.63
56	E17_Da	KnownBoundary	0	199.80	128.44	317.54	200.01	231.93	172.89	186.31
57	E17a_E18a	KnownJunction	0	5.19	1.63	13.24	4.88	4.01	7.96	4.41
58	ER17b	ExonRegion	0	225.25	139.99	383.33	233.62	352.07	202.80	196.15
59	E17b_E18a	KnownJunction	0	256.34	158.05	453.00	253.46	415.71	219.49	196.00
60	ER18a	ExonRegion	0	105.38	37.39	161.33	74.04	143.53	70.86	77.33